Gene Pden_4232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4232 
Symbol 
ID4582782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1393547 
End bp1394350 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content74% 
IMG OID639771539 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_917992 
Protein GI119386937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.132517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.880736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGA AACCGCTGCT GCCGCCGGTC GTCGTGAACG GCGTGACCAT CGACCCCGGC 
CGCATCGCGG CCGAGGCGCA GAACCATCCC GCGCCCAAGG GCAAGCCCGG CCATGCCTGG
CGGGCCGCGG CCCGGGCGCT GGCGGTGCGC GAGCTTCTGC TGCAAGAGGC GCGCTCGCGG
GGCATCGCCG CCGAGCCGGC CGAGCTTGCC CCCGGCCAAT GGGAGACCGA GGACGAGGCC
GCGATCCGCG CCCTGCTGGA CCTGGCGATC CGGCCCGCGC CCGCCGACGA GGCGGCGCTG
GCCGCGCATT ACGCCGCGCA TCCCGAACAG TTCCGTGCCC CCTCGCTTTA CGAGGCGGCG
CATATCCTGT TCGCCGCCGC GCCCGAGGAT ACCTCGGCTC GCACCGAGGC GCGGGCGCGG
GCCGAGGCGG TGCTGGCCGA ACTCCGGGCC GAGCCGCGGC GGTTTGCCGA ACTGGCCGCG
CGTTACAGCG CCTGCTCGTC CAAAACCGCC GGCGGGATGC TGGGGCAACT GACCTCGGGC
GATACCGTGC CCGAGTTCGA TGCCGTGCTG GCCACCATGG AGGAGGGCGC GCTGGCCCTG
GCCGAGACGC GCTACGGCCT GCATGTCATC CGGCTGGATG CCCGGGCGCG GGGCGAGGTC
CTGCCATTCG AGTCCGTGCT GCCGCAATTG CGGCAGGCGC ATGACAAGGC GGCCTGGCTG
CGCGCCAGCC GCGACTACCT GGACGGGCTG GTCGCCGGGG CCGAGATCTC GGGCATTTCC
TTCGACCAGC AGGGGCGCGC GTGA
 
Protein sequence
MQMKPLLPPV VVNGVTIDPG RIAAEAQNHP APKGKPGHAW RAAARALAVR ELLLQEARSR 
GIAAEPAELA PGQWETEDEA AIRALLDLAI RPAPADEAAL AAHYAAHPEQ FRAPSLYEAA
HILFAAAPED TSARTEARAR AEAVLAELRA EPRRFAELAA RYSACSSKTA GGMLGQLTSG
DTVPEFDAVL ATMEEGALAL AETRYGLHVI RLDARARGEV LPFESVLPQL RQAHDKAAWL
RASRDYLDGL VAGAEISGIS FDQQGRA