| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4226 |
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| Symbol | |
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| ID | 4582776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1387729 |
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| End bp | 1389198 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639771533 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_917986 |
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| Protein GI | 119386931 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGTC TTCCCTCGTT TCCCGATCTG CGGGCCTTCC TGTCCTGGCT AGAGGCGCGG
GGCGAGCTTG CCCGCATCGC CGAGCCGGTG TCGCTGCGCC ACGAGATGAC CGCGGTGCAA
CTGGCCTGCC TGCGCCGCGG CGGCCCGGCG CTGCGCTTCG ACCGGCCCCA GGGGGCGCGC
ATTCCCGTTG TCGCCAATCT TTTCGGCACG CGGGCGCGGG TCGCGGCCGG GCTGGGGCTG
CAGCCGGACG AGATCGCGGG CTTTGGCGAG TTCCTGGCCG CGCTGCGCAG CCCGGCCCCC
GTCGAGGGCA TGCGCGACGC CATGTCGCGC TGGCCGATGC TGCGCGCGGC GCTGGCGACG
CGGCCCAGGC TTTTGCGCCA CGGCCCGGTG CAGGAGGAGG AATTGCCCGG CCTCGATTCG
CTGCCGGTGC AGACGCCCTG GCCGGGGGAT GGCGGGCCTC TGATCACCTG GCCGGTGGTA
CTGACCCGGC CGCAGGACAG CCGGACCGAG GATCTGACCC GCTACAACCT CGGCGTCTAT
CGCGCGCAGG TGCTGGCGCC CGACCGGCTG ATCCTGCGCT GGCTGGCGCA TCGCGGCGGG
GCGGCGCATC ACCGCAGCTG GGCGCGGGCG GGCGAGCCGA TGCCCGTCGC CATCGCGCTT
GGCGCCGATC CGGCGCTGCT GCTGGCCGCC GCGTTGCCGC TGCCCGAGAC GGTTTCGGAA
CTGGGCTTTT CCGGCGTGCT GCGCGGTGCG CGCAGCGAAC TCGTCGCAGC GCAGACCGTG
CCGCTGATGG TGCCCGCCCG CGCCGAAGTG ATCGTCGAGG GCTGGGTCCA TCCCGGCGAG
ACGGCGCCCG AGGGACCGTT CGGCGACCAT ACCGGCTATT ACAACGCCGT CGAACCCTTT
CCGGTCATGC GCGTCAGCCG CATCACCTGC CGCAGCGATC CGCTTTACCT GTCCACCGTG
ACCGGCCGGC CGCCCGATGA GCCTTCGGTC ATCGGCGAGG TGTTCAACGA CCTGGCCCTG
CCGGTGATCC GCGCCCAGAT CCCCGAGATC ACCGACCTGT GGCTGCCGCC CGCCGCCTGT
TCCTATCGCA TGGCGGTGGT GGCGATCGAC AAGCGCTATC CCGGCCAGGC GCGGCGGGTG
ATGATGGCGC TGTGGGGGAT GCTGCCGCAA TTCAGCTATA CCAAGCTGGT CGTGGTGGTG
GACCGCGACA TCGACGTGCG CAGCTGGGAC GACATCGCCT GGGCGATCTC GACCCGGATG
GACCCCGGCC GCGACGTGAT GCTGATCGAC CGCACGCCGA TGGATTACCT TGACTTCGCC
TCGCCCGTCG AGGGGCTGGC GGGCAAGCTG GGGCTGGACG CCACCACCAA GATCGGCGCC
GAGACCGCCC GCGAATGGGG CCGCGTCATG CAACTGGACC CTAAGCACGA GGCGCGGGCC
GAGGCGCTGC TCGACGCGGT GCTGCCATGA
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| Protein sequence | MRSLPSFPDL RAFLSWLEAR GELARIAEPV SLRHEMTAVQ LACLRRGGPA LRFDRPQGAR
IPVVANLFGT RARVAAGLGL QPDEIAGFGE FLAALRSPAP VEGMRDAMSR WPMLRAALAT
RPRLLRHGPV QEEELPGLDS LPVQTPWPGD GGPLITWPVV LTRPQDSRTE DLTRYNLGVY
RAQVLAPDRL ILRWLAHRGG AAHHRSWARA GEPMPVAIAL GADPALLLAA ALPLPETVSE
LGFSGVLRGA RSELVAAQTV PLMVPARAEV IVEGWVHPGE TAPEGPFGDH TGYYNAVEPF
PVMRVSRITC RSDPLYLSTV TGRPPDEPSV IGEVFNDLAL PVIRAQIPEI TDLWLPPAAC
SYRMAVVAID KRYPGQARRV MMALWGMLPQ FSYTKLVVVV DRDIDVRSWD DIAWAISTRM
DPGRDVMLID RTPMDYLDFA SPVEGLAGKL GLDATTKIGA ETAREWGRVM QLDPKHEARA
EALLDAVLP
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