Gene Pden_4211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4211 
SymbolactP 
ID4582761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1371664 
End bp1373379 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content66% 
IMG OID639771518 
Productacetate permease 
Protein accessionYP_917971 
Protein GI119386916 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.31095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACA ACATCCTGCG CAAGGGCCTG CTGGCCGCGG CCCTGGCCGT GCCCGGCAGC 
GCCATGGCCG CCGACGTGAT CCAGGGCGCC GAGAAACAGG CGACGAACTG GACCGCCATC
ACCATGTTCG CCGCCTTCGT GCTGGCGACG CTCTACATCA CCAAATGGGC GGCCGCGAAA
ACCAAGTCGG CGGCGGATTT CTATACCGCC GGCGGCGGCA TCACCGGCTT CCAGAACGGC
CTCGCCATCG CCGGCGACTA CATGTCGGCC GCATCCTTCC TGGGGATTTC GGCCGCCGTG
ATGATCTCGG GCTATGACGG GCTGATCTAT TCGATCGGCT TCCTGGTCGG CTGGCCGATC
CTGACCTTCC TGATGGCCGA GCGGCTGCGC AACCTGGGCC GCTTCACCTT TGCCGACGTG
GCGGCCTTCC GCTTTGCCCA GACCCCGGTG CGCATCTTCG CCGCCTCGGG CACGCTGGTC
GTGGTGGCCT TCTACCTGAT CGCGCAGATG GTGGGCGCGG GCTCGCTGAT CCAGCTGCTG
TTCGGGCTGG ACTACTGGAT CGCCGTGGTG ATCGTCGGCG CGCTGATGAT GATCTATGTG
CTTTTCGGCG GCATGACCGC GACGACCTGG GTGCAGATCA TCAAGGCCTG CCTGCTGCTG
GGCGGCGCGT CCTTCATGTC CTTCATGGTC ATGTGGCACT ATGGCTTCAG CCCCGAGGCG
ATGTTCGCCG ATGCCGTGCG CGTCAAGGCC GAGCTGGCAA CCGCCGGCGG CAAGACCGCC
GAGGAAGCCG CGGTTGCGGG CCAGTCGATC ATGGGTCCGG GCACTTTCAT CAAGGATCCG
ATCTCGGCCA TCAGCTTCGG CATGGCGCTG ATGTTCGGCA CCGCCGGCCT GCCGCATATC
CTGATGCGCT TCTTCACCGT TCCCAGCGCC AAGGAAGCGC GCAAGTCGGT GATGTGGGCG
ACCGGCTGGA TCGGCTACTT CTACCTGCTG ACCTTCATCA TCGGCTTTGG CGCCATCACC
TTCGTGCTGA CCAATCCCGA GTTCCTGGAC GGCTCCGGCG CGCTGGTCGG CGGCTCCAAC
ATGGCGGCCG TGCATCTGGC GCAGGCGGTG GGCGGCAACG TCTTCCTGGG CTTCATCTCG
GCCGTGGCCT TCGCTACCAT CCTGGCGGTG GTCGCCGGGC TGACGCTCTC GGGCGCCTCG
GCGGTCAGCC ATGACCTCTA TGCGACCGTG ATCAAGAACG GCAACCCCGC GCCGGGCAGC
GAGCTGCGCG TCTCGCGCAT CACCACGCTG GTGCTGGGCC TGGTCGCGGT CGTGCTGGGC
ATCGCCTTCA AGAACCAGAA CATCGCCTTC ATGGTGTCGC TGGCCTTCGC GGTGGCTGCC
TCGGCCAACT TCCCGGTGCT GTTCATGTCG GTGCTGTGGA AGGATTGCAC GACCAAGGGC
GCGGTGACCG GCGGCTTCCT GGGGCTGATC TCCTCGGTGG TGCTGACGAT CCTGTCGCCC
TCGGTCTGGG AGGCGACGCT GGGCAACCCT GCCGGATCGG CGCCCTTCCC CTATACCTCG
CCGGCGCTGT TCTCGATGAC CCTGGCCTTC CTGGGCATCT GGATCGTGTC CAAGATGGAC
AACGGCGCGC GGGCACGCAT CGACCGGGCG GGCTATCTGG CCCAGCAGGT GCGCTCGGAA
ACCGGGATCG GCGCGTCGGA AGCCTCGTCG CACTGA
 
Protein sequence
MNHNILRKGL LAAALAVPGS AMAADVIQGA EKQATNWTAI TMFAAFVLAT LYITKWAAAK 
TKSAADFYTA GGGITGFQNG LAIAGDYMSA ASFLGISAAV MISGYDGLIY SIGFLVGWPI
LTFLMAERLR NLGRFTFADV AAFRFAQTPV RIFAASGTLV VVAFYLIAQM VGAGSLIQLL
FGLDYWIAVV IVGALMMIYV LFGGMTATTW VQIIKACLLL GGASFMSFMV MWHYGFSPEA
MFADAVRVKA ELATAGGKTA EEAAVAGQSI MGPGTFIKDP ISAISFGMAL MFGTAGLPHI
LMRFFTVPSA KEARKSVMWA TGWIGYFYLL TFIIGFGAIT FVLTNPEFLD GSGALVGGSN
MAAVHLAQAV GGNVFLGFIS AVAFATILAV VAGLTLSGAS AVSHDLYATV IKNGNPAPGS
ELRVSRITTL VLGLVAVVLG IAFKNQNIAF MVSLAFAVAA SANFPVLFMS VLWKDCTTKG
AVTGGFLGLI SSVVLTILSP SVWEATLGNP AGSAPFPYTS PALFSMTLAF LGIWIVSKMD
NGARARIDRA GYLAQQVRSE TGIGASEASS H