Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4211 |
Symbol | actP |
ID | 4582761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1371664 |
End bp | 1373379 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639771518 |
Product | acetate permease |
Protein accession | YP_917971 |
Protein GI | 119386916 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.31095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACA ACATCCTGCG CAAGGGCCTG CTGGCCGCGG CCCTGGCCGT GCCCGGCAGC GCCATGGCCG CCGACGTGAT CCAGGGCGCC GAGAAACAGG CGACGAACTG GACCGCCATC ACCATGTTCG CCGCCTTCGT GCTGGCGACG CTCTACATCA CCAAATGGGC GGCCGCGAAA ACCAAGTCGG CGGCGGATTT CTATACCGCC GGCGGCGGCA TCACCGGCTT CCAGAACGGC CTCGCCATCG CCGGCGACTA CATGTCGGCC GCATCCTTCC TGGGGATTTC GGCCGCCGTG ATGATCTCGG GCTATGACGG GCTGATCTAT TCGATCGGCT TCCTGGTCGG CTGGCCGATC CTGACCTTCC TGATGGCCGA GCGGCTGCGC AACCTGGGCC GCTTCACCTT TGCCGACGTG GCGGCCTTCC GCTTTGCCCA GACCCCGGTG CGCATCTTCG CCGCCTCGGG CACGCTGGTC GTGGTGGCCT TCTACCTGAT CGCGCAGATG GTGGGCGCGG GCTCGCTGAT CCAGCTGCTG TTCGGGCTGG ACTACTGGAT CGCCGTGGTG ATCGTCGGCG CGCTGATGAT GATCTATGTG CTTTTCGGCG GCATGACCGC GACGACCTGG GTGCAGATCA TCAAGGCCTG CCTGCTGCTG GGCGGCGCGT CCTTCATGTC CTTCATGGTC ATGTGGCACT ATGGCTTCAG CCCCGAGGCG ATGTTCGCCG ATGCCGTGCG CGTCAAGGCC GAGCTGGCAA CCGCCGGCGG CAAGACCGCC GAGGAAGCCG CGGTTGCGGG CCAGTCGATC ATGGGTCCGG GCACTTTCAT CAAGGATCCG ATCTCGGCCA TCAGCTTCGG CATGGCGCTG ATGTTCGGCA CCGCCGGCCT GCCGCATATC CTGATGCGCT TCTTCACCGT TCCCAGCGCC AAGGAAGCGC GCAAGTCGGT GATGTGGGCG ACCGGCTGGA TCGGCTACTT CTACCTGCTG ACCTTCATCA TCGGCTTTGG CGCCATCACC TTCGTGCTGA CCAATCCCGA GTTCCTGGAC GGCTCCGGCG CGCTGGTCGG CGGCTCCAAC ATGGCGGCCG TGCATCTGGC GCAGGCGGTG GGCGGCAACG TCTTCCTGGG CTTCATCTCG GCCGTGGCCT TCGCTACCAT CCTGGCGGTG GTCGCCGGGC TGACGCTCTC GGGCGCCTCG GCGGTCAGCC ATGACCTCTA TGCGACCGTG ATCAAGAACG GCAACCCCGC GCCGGGCAGC GAGCTGCGCG TCTCGCGCAT CACCACGCTG GTGCTGGGCC TGGTCGCGGT CGTGCTGGGC ATCGCCTTCA AGAACCAGAA CATCGCCTTC ATGGTGTCGC TGGCCTTCGC GGTGGCTGCC TCGGCCAACT TCCCGGTGCT GTTCATGTCG GTGCTGTGGA AGGATTGCAC GACCAAGGGC GCGGTGACCG GCGGCTTCCT GGGGCTGATC TCCTCGGTGG TGCTGACGAT CCTGTCGCCC TCGGTCTGGG AGGCGACGCT GGGCAACCCT GCCGGATCGG CGCCCTTCCC CTATACCTCG CCGGCGCTGT TCTCGATGAC CCTGGCCTTC CTGGGCATCT GGATCGTGTC CAAGATGGAC AACGGCGCGC GGGCACGCAT CGACCGGGCG GGCTATCTGG CCCAGCAGGT GCGCTCGGAA ACCGGGATCG GCGCGTCGGA AGCCTCGTCG CACTGA
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Protein sequence | MNHNILRKGL LAAALAVPGS AMAADVIQGA EKQATNWTAI TMFAAFVLAT LYITKWAAAK TKSAADFYTA GGGITGFQNG LAIAGDYMSA ASFLGISAAV MISGYDGLIY SIGFLVGWPI LTFLMAERLR NLGRFTFADV AAFRFAQTPV RIFAASGTLV VVAFYLIAQM VGAGSLIQLL FGLDYWIAVV IVGALMMIYV LFGGMTATTW VQIIKACLLL GGASFMSFMV MWHYGFSPEA MFADAVRVKA ELATAGGKTA EEAAVAGQSI MGPGTFIKDP ISAISFGMAL MFGTAGLPHI LMRFFTVPSA KEARKSVMWA TGWIGYFYLL TFIIGFGAIT FVLTNPEFLD GSGALVGGSN MAAVHLAQAV GGNVFLGFIS AVAFATILAV VAGLTLSGAS AVSHDLYATV IKNGNPAPGS ELRVSRITTL VLGLVAVVLG IAFKNQNIAF MVSLAFAVAA SANFPVLFMS VLWKDCTTKG AVTGGFLGLI SSVVLTILSP SVWEATLGNP AGSAPFPYTS PALFSMTLAF LGIWIVSKMD NGARARIDRA GYLAQQVRSE TGIGASEASS H
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