Gene Pden_4196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4196 
Symbol 
ID4582746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1353021 
End bp1354331 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content72% 
IMG OID639771503 
Producthypothetical protein 
Protein accessionYP_917956 
Protein GI119386901 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGACG ATGCGGTGCA GGCCGAACGG CTGGGTGCGG CGCTGGTCAG CCGCCGTTGC 
GGGCTGGTGC GCGAACTCGC GCCGCAGGGC AGGGGCCCCG AGGAACCCTG TCCGCCGCAT
CTGTGGACGG CGACGCTGGC GCATTATGAT TTCCGCGCCG CCGGTCCCTC CGAGCGGCTG
AATGCCGGCA AGGGCCGGAC CGAGGCCGAG GCGCGGCTTT CCGCCCTGGG CGAGGCGATC
GAGCGGTATT CGGCCTATCA CTGGGACGCC TCGCGCATCC GCGTCGGCCC GGCGCTGCCC
GGCGCGATCA CCCCCGCCGA TTGCGTGCTG CATTCCGAGG CGCAATATCG CGCCGGCCTG
CCCTATCCGC GCTGGAGTCC CGCGACCGAG ACGAGCTGGA TCGAGGGGGT CGAGCTGCCC
TCGGGCCGGC CGGTCGAACT GCCGGCGGGG CTGGTCTATC TGCTCAGCCC GCTGCCACGG
CCCCAGGATC ATGTCGCCGC CGTCACCTCG AACGGGCTGG CGGCAGGGTC CGACCTGACC
CGCGCCGTCA TCGGCGGGCT TTGCGAGTTG ATCGAGCGCG ATGCGCTGAT GATCACCTGG
CTCAACCGCC TGCCCGCCAC GCTGATCGAG ACGCCCGAGA CCGGCTGCAT GGCCGCCGCG
ATCATCAGGC ACTACCGCCG CTTCGGGGTC GTGGTGCGGC TTTTGTCGCT GGCCACCGAC
CAGGCCGCCT TCGTGGTCAT GGCCGTGGCC GAGAACCCGG ACCCGGCGCA GGGCGCGCGC
ATCGTCGGCA TGGGTTGCGA CCCCGACCCG GCCTCTGCCG TCGACAAGGC GATGTTCGAG
CTGTGCCAGG CCCGGCCCAG CATGATCTCG CGCCTTGCCC GCAGCGACGC GGCCGAGCGG
TTGCGCGGCC CCGAGGATGT GCGCGACCTC GACGACCACC CGCTTTATCA TGCCCTGCCG
CGCAATCTGG GCGCGTTCGA TTTCCTGTTC GCCTCGGGCA GCCGGGTGCG GCTGGACGAC
CTGCCGCGCC CGGCTGCCCC GGACCCCGAG GCGGTGCTGG CCCGGCTGGT CGAGGCCGCG
AATGCCGCCG GTGCCCGCAT CGCCTATGTC GATATCACCG CGCCGGACAT CGCGCCGCTT
GGCCCGCGCG TGGTGCGCTG CTTTGCGACC GGGTTCCAGC CGATCCATTT CGGCCATGGC
GAGGGCCGCC TGGGCGGGCG CCGGCTTTAC GAGGCGCCGC TGCGCTGGGG CCTGCGCGCC
GAGCCGCTGG CCGAGGCCGA CCTGAATCCC TGTCCCCATC CGCTGGCGTG A
 
Protein sequence
MRDDAVQAER LGAALVSRRC GLVRELAPQG RGPEEPCPPH LWTATLAHYD FRAAGPSERL 
NAGKGRTEAE ARLSALGEAI ERYSAYHWDA SRIRVGPALP GAITPADCVL HSEAQYRAGL
PYPRWSPATE TSWIEGVELP SGRPVELPAG LVYLLSPLPR PQDHVAAVTS NGLAAGSDLT
RAVIGGLCEL IERDALMITW LNRLPATLIE TPETGCMAAA IIRHYRRFGV VVRLLSLATD
QAAFVVMAVA ENPDPAQGAR IVGMGCDPDP ASAVDKAMFE LCQARPSMIS RLARSDAAER
LRGPEDVRDL DDHPLYHALP RNLGAFDFLF ASGSRVRLDD LPRPAAPDPE AVLARLVEAA
NAAGARIAYV DITAPDIAPL GPRVVRCFAT GFQPIHFGHG EGRLGGRRLY EAPLRWGLRA
EPLAEADLNP CPHPLA