Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4196 |
Symbol | |
ID | 4582746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1353021 |
End bp | 1354331 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639771503 |
Product | hypothetical protein |
Protein accession | YP_917956 |
Protein GI | 119386901 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGACG ATGCGGTGCA GGCCGAACGG CTGGGTGCGG CGCTGGTCAG CCGCCGTTGC GGGCTGGTGC GCGAACTCGC GCCGCAGGGC AGGGGCCCCG AGGAACCCTG TCCGCCGCAT CTGTGGACGG CGACGCTGGC GCATTATGAT TTCCGCGCCG CCGGTCCCTC CGAGCGGCTG AATGCCGGCA AGGGCCGGAC CGAGGCCGAG GCGCGGCTTT CCGCCCTGGG CGAGGCGATC GAGCGGTATT CGGCCTATCA CTGGGACGCC TCGCGCATCC GCGTCGGCCC GGCGCTGCCC GGCGCGATCA CCCCCGCCGA TTGCGTGCTG CATTCCGAGG CGCAATATCG CGCCGGCCTG CCCTATCCGC GCTGGAGTCC CGCGACCGAG ACGAGCTGGA TCGAGGGGGT CGAGCTGCCC TCGGGCCGGC CGGTCGAACT GCCGGCGGGG CTGGTCTATC TGCTCAGCCC GCTGCCACGG CCCCAGGATC ATGTCGCCGC CGTCACCTCG AACGGGCTGG CGGCAGGGTC CGACCTGACC CGCGCCGTCA TCGGCGGGCT TTGCGAGTTG ATCGAGCGCG ATGCGCTGAT GATCACCTGG CTCAACCGCC TGCCCGCCAC GCTGATCGAG ACGCCCGAGA CCGGCTGCAT GGCCGCCGCG ATCATCAGGC ACTACCGCCG CTTCGGGGTC GTGGTGCGGC TTTTGTCGCT GGCCACCGAC CAGGCCGCCT TCGTGGTCAT GGCCGTGGCC GAGAACCCGG ACCCGGCGCA GGGCGCGCGC ATCGTCGGCA TGGGTTGCGA CCCCGACCCG GCCTCTGCCG TCGACAAGGC GATGTTCGAG CTGTGCCAGG CCCGGCCCAG CATGATCTCG CGCCTTGCCC GCAGCGACGC GGCCGAGCGG TTGCGCGGCC CCGAGGATGT GCGCGACCTC GACGACCACC CGCTTTATCA TGCCCTGCCG CGCAATCTGG GCGCGTTCGA TTTCCTGTTC GCCTCGGGCA GCCGGGTGCG GCTGGACGAC CTGCCGCGCC CGGCTGCCCC GGACCCCGAG GCGGTGCTGG CCCGGCTGGT CGAGGCCGCG AATGCCGCCG GTGCCCGCAT CGCCTATGTC GATATCACCG CGCCGGACAT CGCGCCGCTT GGCCCGCGCG TGGTGCGCTG CTTTGCGACC GGGTTCCAGC CGATCCATTT CGGCCATGGC GAGGGCCGCC TGGGCGGGCG CCGGCTTTAC GAGGCGCCGC TGCGCTGGGG CCTGCGCGCC GAGCCGCTGG CCGAGGCCGA CCTGAATCCC TGTCCCCATC CGCTGGCGTG A
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Protein sequence | MRDDAVQAER LGAALVSRRC GLVRELAPQG RGPEEPCPPH LWTATLAHYD FRAAGPSERL NAGKGRTEAE ARLSALGEAI ERYSAYHWDA SRIRVGPALP GAITPADCVL HSEAQYRAGL PYPRWSPATE TSWIEGVELP SGRPVELPAG LVYLLSPLPR PQDHVAAVTS NGLAAGSDLT RAVIGGLCEL IERDALMITW LNRLPATLIE TPETGCMAAA IIRHYRRFGV VVRLLSLATD QAAFVVMAVA ENPDPAQGAR IVGMGCDPDP ASAVDKAMFE LCQARPSMIS RLARSDAAER LRGPEDVRDL DDHPLYHALP RNLGAFDFLF ASGSRVRLDD LPRPAAPDPE AVLARLVEAA NAAGARIAYV DITAPDIAPL GPRVVRCFAT GFQPIHFGHG EGRLGGRRLY EAPLRWGLRA EPLAEADLNP CPHPLA
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