| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4186 |
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| Symbol | |
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| ID | 4582736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1341593 |
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| End bp | 1342585 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639771493 |
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| Product | hypothetical protein |
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| Protein accession | YP_917946 |
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| Protein GI | 119386891 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3285] Predicted eukaryotic-type DNA primase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0264097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.220131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGATCG GATGGCCGGC GGCGAACCGC GACCCCGCCG CCGGCGTTGG TCCCGAAAGC
AGCAAGGAGC CGACCATGAC CGAGCGGATC GAGGGTGTGA CCATCTCGCA TCCCGAGCGG
GTGATCTTTG CCGATGCCGG GCCGGGCAAG GCGGGGCTGA CCAAGGCGGG GCTGACCAAG
GCGAGGCTGG CGCGTTACTA CCAGCAGATC GCGCCCCTGA TGCTGGAAGA GGCCGCGAAC
CGCCCGCTGT CGCTTCTGCG CCTGCCCGAC GGGATGGCGG GCGAGCGGTT CTTTCAGAAG
CATCCCGGCA AGGGCTTTCC CAAGGCGATC CGGCAGATGC AGATCACCGA AAGCGACGGC
GAAGCCGCGC CCTATGCCTA TGTCACCGAT GCCGCGGGGC TGGTCGCCGC CGTGCAGATG
GGCACGGTCG AGTTCCATAT CTGGCCCGCC CGCCGCGACC GGCTGGAGCG GCCCGACCGG
CTGGTCCTGG ACCTCGACCC CGATGAGGGG CTGGGCTTCG ATGCGGTGCG CAGCGCCGCC
CTGTCGCTGC GCGGCCGGCT GCTGGACCTG GGGCTTGAGC CCTGGGCGAT GCTGACCGGC
GGCAAGGGCG TGCATCTGGT GGTCCCGCTG CGCCGCAGCC TCGGCTGGGA CGATCTCAAG
CGTTTCGCCC GCGGCTTTGC CGCGCTTTGC GCGCAAGAGG AACCGGATCG CTATACGGTG
GAACTGGCCA AGGCCAGCCG CAGGGGCCGG ATCTTCATCG ACTGGCTGCG CAACGAGCGC
GGCTCGACGG CGGTCGCGCC CTTTTCGGTG CGCGCCCGGC CCGGCGCGCC GGTGGCGGCC
CCGATCGGCT GGGACGAACT GGCCCGGATC AGCACCGCCC GCGCCTTCGG CATCGCTGCG
GCGCAAGAGC GCGGCTGGGC CGGCGTGACG CGGGTGCAAC AAAGCCTGAC CCGGCCCATG
TTCGAGGCGG TGGAGAAGGC GCTGGCCGGT TGA
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| Protein sequence | MRIGWPAANR DPAAGVGPES SKEPTMTERI EGVTISHPER VIFADAGPGK AGLTKAGLTK
ARLARYYQQI APLMLEEAAN RPLSLLRLPD GMAGERFFQK HPGKGFPKAI RQMQITESDG
EAAPYAYVTD AAGLVAAVQM GTVEFHIWPA RRDRLERPDR LVLDLDPDEG LGFDAVRSAA
LSLRGRLLDL GLEPWAMLTG GKGVHLVVPL RRSLGWDDLK RFARGFAALC AQEEPDRYTV
ELAKASRRGR IFIDWLRNER GSTAVAPFSV RARPGAPVAA PIGWDELARI STARAFGIAA
AQERGWAGVT RVQQSLTRPM FEAVEKALAG
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