| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4177 |
|---|
| Symbol | |
|---|
| ID | 4582727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1333354 |
|---|
| End bp | 1334817 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639771484 |
|---|
| Product | mannitol dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_917937 |
|---|
| Protein GI | 119386882 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.25233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGGC TTTCCAACCA GACCCTCGAC CGCCTCGGCC AGCCGGTGCC GGGCTACGAC
CGCGCCGCCC TGCGCGCCGG CATCCTGCAT TTCGGGGTCG GCAACTTCTT TCGCGCCCAT
CAGGCCGCCT ATCTGGACCG GCTGATGAAC ATGGGGCTGG CGCAGGACTT CGCCATCATC
GGCGCCGGCG TCATGCCGGG CGACGCCAGG ATGCGCGACA CGCTGGCCGC GCAGGATTAC
CTCTATACGC TGGTCGAGCA ATCGGCCGAG CGCTCGGACG CGCGCGTGCT GGGGCCGATC
GTGGACTATA TCGCGCCGGG CGACCATCGG CGGGTGATTG CGGCGCTGGC CGATCCGGCG
ATCCGCATCG TGGCGCTGAC CATCACCGAG GGCGGCTATT TCATCGACGC CGCCACCGGG
CATTTCGACC CCACGCATCC CGCCATCGCC GCCGATGCCG CCAGCCCCGA CGCGCCGCAG
ACCGTCTTCG GCCTGATCGT CGCGGGGCTC AAGGCGCGCC GGGCGGCGGG GCACGCGCCC
TTCACCGTCA TGTGCTGCGA CAACATCCCG CATAACGGCC ATGTCACCCG CGAGGCGGTG
GCCGAAACAG CGCGGCTCTT GGACACGCAG CTGGCCGAGT GGATCCTGGC GAATGTCGCC
TTTCCGAATG CCATGGTGGA CCGCATCACG CCGGCGACCT CGGATCGCGA GCGCCGCATG
GTGCGCGAGG ATTTCGGCAT CCATGACGAA GCCCCGGTGT TTTGCGAGGA TTTCATCCAA
TGGGTGCTCG AGGACAACTT TCCCGCCGGC CGGCCGCCGC TGGAAAAGGC CGGTGTCGAG
TTCGTCGCCG ACGTGACGCC ATGGGAGCTG ATGAAGATCC GCATCCTGAA CGGCGGCCAT
GCGGTGATCG CCTATCCGGC CGGGCTTCTG GACATCCATT TCGTGCATGA GGCGATGGAG
GACGCGCAGG TCCGCGCCTT CCTGGAAAAG ATCGAGGCGG ATGAGATCAT CCCCGCCGTG
CCGCCGGTGC CCGGCACTGA CCTTGGCGCC TATTTCGCCA AGGTGGCCGA ACGCTGCGCC
AATCCCAAGA TCGGCGATAC GGTGCGCCGG CTTTGCCTGG ACGGCTCGAA CCGGCAGCCG
AAATTCATCG TGCCGACCAT CGCGCACCGG CTGGAGCGCG GGTTGCCGGT CGAGGGGCTG
GCGCTGGAAT CGGCGCTGTG GTGCCGCTAT TGCGCCGGGA CCACCGACAG CGGCGCGGTG
ATCGAGCCGA ACGACCCGGA TTGGGACAAG CTCGTCCAGG TGGCGCAGGC GGCCCGGACC
GACCCTTCGG CCTGGCTCGG CATGGCCGAG ATCTATGGCG GGACCGGCCG CGATCCGCGC
CTGGCCGAGC CTTTCGCGCG ATGGCTCGCC ATGCTGTGGG ACAGGGGCAC GCGCTCGACG
CTTGATGCCT ATCTCAAGGG CTAG
|
|---|
| Protein sequence | MDRLSNQTLD RLGQPVPGYD RAALRAGILH FGVGNFFRAH QAAYLDRLMN MGLAQDFAII
GAGVMPGDAR MRDTLAAQDY LYTLVEQSAE RSDARVLGPI VDYIAPGDHR RVIAALADPA
IRIVALTITE GGYFIDAATG HFDPTHPAIA ADAASPDAPQ TVFGLIVAGL KARRAAGHAP
FTVMCCDNIP HNGHVTREAV AETARLLDTQ LAEWILANVA FPNAMVDRIT PATSDRERRM
VREDFGIHDE APVFCEDFIQ WVLEDNFPAG RPPLEKAGVE FVADVTPWEL MKIRILNGGH
AVIAYPAGLL DIHFVHEAME DAQVRAFLEK IEADEIIPAV PPVPGTDLGA YFAKVAERCA
NPKIGDTVRR LCLDGSNRQP KFIVPTIAHR LERGLPVEGL ALESALWCRY CAGTTDSGAV
IEPNDPDWDK LVQVAQAART DPSAWLGMAE IYGGTGRDPR LAEPFARWLA MLWDRGTRST
LDAYLKG
|
|---|
| |