| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4174 |
|---|
| Symbol | |
|---|
| ID | 4582724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 1330301 |
|---|
| End bp | 1331233 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639771481 |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_917934 |
|---|
| Protein GI | 119386879 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACC AGGGCCGGAA ACTGGAACAG GCGGCCAAGG CGGCGTGGCT CTCTTACGTC
GCGGGCAAGA CCCAGGACGA GATCGCGGGG ATCATGGGCA TCTCGCGCCA GACCGCGCAG
CGCCTGGTCG CGCAGGCCAT GGCCGAGGGC ATCGTCAAGA TCCGCATCGA CCATCCCTTT
GCCCATTGCA TGGACCTTGC CGCCGAATTG CAGCGCAAAT ACCGGCTGGA TTTCTGCCAG
ATCGCGCCCT CGGACGCACC CGAGGCCGGG GTGGCCCTGA TGCTGGCCGA CGTGATCGAG
CAATGGCTGC GCCGGGCCGA GCCGATGACC ATGGCGATCG GCACCGGCCG CACCCTGCGC
AGCGCCATCG CGCAATTGCC GCATATCGAC TGCCCGCAGC ACCGCATCGT CTCGCTGACC
GGCAATATCG CGCCGGACGG CTCGACTGCC TATTACAACG TGCTGTTCAC GCTTTCGGAC
CTGGTCAGCG CGCGCAGCTT TCCCCTGCCG CTGCCGGTCA TCGCCCCCAG CGTGCGCGAA
CGGCAGGCAG TCAACAGCCA GCCCAGCATC GAGCGGCTGA TCCGCATGTC CGCCGGGGCC
GCGGTCGCCT TCGTCGGCAT CGGCACGGTG GGCGCGCAGG CTCCGCTGAT GCTGGACGGG
TTCCTGTCGC AGCCCGACCT GGACGCGCTG GTCGCGGCCG GCGCGGTGGG CGAGATCACC
GGCTGGGCCT ACGACGCGCG GGGCGCGCTG GTGGCGGGGC TCAGCAACGA CCGCGTGGCC
TCGGCACCGA TCCCGCCGCG CGAGACGACG CTGGTGATCG GCGCGGCCCA TGGCGCCGAA
AAGGTGCCGG CGATCCGCGG CGCGCTGCGC GGCGGGCTGA TCAGCGGGCT GATCACCGAT
GCCGCGACCG GGGCCGCATT GCTGGCCGAT TGA
|
|---|
| Protein sequence | MSNQGRKLEQ AAKAAWLSYV AGKTQDEIAG IMGISRQTAQ RLVAQAMAEG IVKIRIDHPF
AHCMDLAAEL QRKYRLDFCQ IAPSDAPEAG VALMLADVIE QWLRRAEPMT MAIGTGRTLR
SAIAQLPHID CPQHRIVSLT GNIAPDGSTA YYNVLFTLSD LVSARSFPLP LPVIAPSVRE
RQAVNSQPSI ERLIRMSAGA AVAFVGIGTV GAQAPLMLDG FLSQPDLDAL VAAGAVGEIT
GWAYDARGAL VAGLSNDRVA SAPIPPRETT LVIGAAHGAE KVPAIRGALR GGLISGLITD
AATGAALLAD
|
|---|
| |