| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4173 |
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| Symbol | |
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| ID | 4582723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1327758 |
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| End bp | 1329977 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639771480 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_917933 |
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| Protein GI | 119386878 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCAG ACGACAAGAC CAGAGCCTTT CCCCGGATGA TCCCCGCGCT GACCGGGCTG
GCCGCCGGCC TGTCCTTGCA GGCGGGTGCT GCGCTGGCGC AATCGGCCTC GCCCGGCGCG
GTGATCGTGC TGGACCAGAT CGAGATCCGC GCCGACACCA CCGCGCGGCG CTTCGAGGCG
ACGCCGGGCG CTGTGGCGCT GATCGACCGC AGCGATGCGT CGGGCGAGGC GGCGCCGACG
CTGGCCGACA CGCTGTCCGA GGTGCCCGGC GTCGTCGTGC AGGAGTTCTT CGGCGGCAAC
GACCAGCCGC GCATCCAGAT CCGCGGCTCG GGCCTGCAAC AGAACCCGGC CGAGCGCGGC
CTGCTGATCC TTCAGGACGG CATGCCGGTG AACCGCGCCG ACGGCTCCTA TGTCGTCGGC
CTTGCGGCGC CCGGCCAGGC CGAGAGCATC GAGGTGTTTC GCGGCGCCTC GGCCAACCGC
ATCGGCGCGA ACGTGCTGGG CGGTGCGATC AACTTCGCCT CGCCCTCGGG GGCCTCGGCG
CCGGGGATGC GGCTCAGCTT CGGCGGCGGC AGCTTCGGGC GGGGCGAGGT CGCGGGCAGC
TATGGCATCG ACGGCGAGCG CGCCGATGTG CTGCTGCGCT TCGAACACGC GCAGAAGGAC
GGCTATCGCG ACTACAACGG CTCGCGCCGC ACGGGGATCG GCGGCAACGT CACCTTGCAG
ACGGGCGAGG CTGTGACGCG GCTGTTCCTC AGCCATACCG ACCTGGAATT CGACGTGGCC
GGGCCGCTGA CCTGGGACGC GATCCGGAAC GATCCAGAAA GCAACCATGC CGGGCCGGTG
ATCGTCGGCG GCGTGCCGGA GGGGCCGGGG CCGAACGTGC TGCGCGACCG GCCCCGGCGC
GAGACCCGGC AGACCCTGGC CGGGGCGCGG ACGACGCTGG AGCGCGGCGA GAACATCTAT
GACTTCGGCC TGAGCCTGTC GCGGACGGAT GACAGCTTCG CCTTTCCGAT CTCGGCCGGG
TTCCGCGACA CCGAGGGCAC CGACGCGACG CTGACCGCGC GCTACAGCCG ACTGGGCGAG
GGGGCGTTGC CGTTGTTCGA GACCGGCCTG ACCTGGTCCT TCGGCAAGGC CGACCGCGAT
TATTTCCACA ACTTGGGCGG CGCGCGCGGC CCGGCCTTCG GCCGCAACCG GCTGACGGCC
GATACGGTGT CGGTCTTTGC CGGGGCGAAC CTGCCGCTGG GTGGGTTCAC CTTGTCGCCC
TCGATCGCCT TCAACCATGC CAGTCGCGAA AGCGATGACC GCTGGGGCGG GGCGACCCGG
CCGACGGTGG CCTACAGCCC GATGAACCCC GGCATGCGCC TGCCCGATGG GGCGGTGCCG
GCGGTCTCGA CCAGCTACGA CCGCAGCTAT AGCGGCTTCA CCCCGGCGCT GGCCCTGTCC
TGGACCCCGG CCGAGGGGCA GTTCGCCTGG ATCTCGCTGG CGCGGGGTTT CGAGCCGCCG
ACCCATGACG ACCTGCTGGG CACGGTGGGC GGCACGCCGA ACAGCGGGCC GGGCCGGCCG
AACCCCGCCG ATCCCGCGGC GCCGGCGGCG ATGTTCGCGA CGCCCGACCT GGAGGCGCAG
ACCTCGACCA CGCTGGAGCT GGGCTGGCGC GGGACGTGGC AGAACCTGTC CTGGGACGCG
ACCGTCTATC ACGCGCGGCT GAAGAACGAA CTGCTTTCGC TGCGCGACGT GACCGGCGCC
ACGCTGGCCT CGGTCAATGC CGGGCGGACG CGGCACAGCG GGGTCGAGCT TGGCCTGTCG
GGCGATCTTG CGGAAACGCT GGCGGCGCGG CTGGCATGGA CCTGGCAGGA TTTCCGCTTC
GACGACGATC CCTTGCGCGG CGACAACCGC ATTGCCGGCG CGCCGCGCAA CGTGATCTCG
CTGGTGCTGG ACTGGCGCCC GGTCGAGCGG CTGACGGTCA CCGGCAAGTT GCATTGGGTG
CCGGGCAAGA CGCCGGTGGA CAACATGAAC ACGGTATTCA ACGACCCTTA TGCGCTGGTC
GATCTGGGGG TCGAATACGC GCTGACGCCG AATGCCCTGG TCCATCTCCA GGTCACCAAC
CTGACGGATG AACGATATGC CGCCTCGACG CTGGTCGTGG ACCAGGCATC GGCGGGGCAG
GCGGCCTTCA TCCCGGGCGA AGGGCGGGCC TTCTATCTGG GCACGCGGCT GCGGTTCTGA
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| Protein sequence | MDADDKTRAF PRMIPALTGL AAGLSLQAGA ALAQSASPGA VIVLDQIEIR ADTTARRFEA
TPGAVALIDR SDASGEAAPT LADTLSEVPG VVVQEFFGGN DQPRIQIRGS GLQQNPAERG
LLILQDGMPV NRADGSYVVG LAAPGQAESI EVFRGASANR IGANVLGGAI NFASPSGASA
PGMRLSFGGG SFGRGEVAGS YGIDGERADV LLRFEHAQKD GYRDYNGSRR TGIGGNVTLQ
TGEAVTRLFL SHTDLEFDVA GPLTWDAIRN DPESNHAGPV IVGGVPEGPG PNVLRDRPRR
ETRQTLAGAR TTLERGENIY DFGLSLSRTD DSFAFPISAG FRDTEGTDAT LTARYSRLGE
GALPLFETGL TWSFGKADRD YFHNLGGARG PAFGRNRLTA DTVSVFAGAN LPLGGFTLSP
SIAFNHASRE SDDRWGGATR PTVAYSPMNP GMRLPDGAVP AVSTSYDRSY SGFTPALALS
WTPAEGQFAW ISLARGFEPP THDDLLGTVG GTPNSGPGRP NPADPAAPAA MFATPDLEAQ
TSTTLELGWR GTWQNLSWDA TVYHARLKNE LLSLRDVTGA TLASVNAGRT RHSGVELGLS
GDLAETLAAR LAWTWQDFRF DDDPLRGDNR IAGAPRNVIS LVLDWRPVER LTVTGKLHWV
PGKTPVDNMN TVFNDPYALV DLGVEYALTP NALVHLQVTN LTDERYAAST LVVDQASAGQ
AAFIPGEGRA FYLGTRLRF
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