Gene Pden_4168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4168 
Symbol 
ID4582718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1324368 
End bp1325186 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content72% 
IMG OID639771475 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_917928 
Protein GI119386873 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.95605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.544796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGC TTGCGGCCTG TCTCGACCGG CTGGCGCGGC TGGGCCGGTT CCTGTGGTCG 
GCCTGGGCCG GGCTGGCGGG GCTCGCGCTG ATCGGTGCGC TGTGGCAGGC GGGGCACGAG
GCCTATGGCG ACTTCATCCT GACCGCGCCG CTGGACACGC TGGCCGCCGC GGCGCGGCTT
TTGCACGAGG GCAGGGCGCA GGAACTGCTG GCGCTGACCA CCGCCCGAGC GCTGGCCGGT
TTCGGGCTTT GTGCGCTGAT CGGCACGCTG GCCGGGGTGG CGGCGGGCTA TTCGCCGGCC
ACGCTGCGGC TGTCGCGGCC GGTCCTGACC CTGCTTCTGG GCGTGCCGCC GATCGCCTGG
ATCGTGCTGG CGATGATCTG GTTCGGCCCC TCGGACATGA CCGTGGCGGT GACGATCCTG
ATCTCGGCCA CGCCTGTGGT CTTTGTCGGC GCGGTCGAGG GGGTGGTGAC GCGCGACCGC
GGCCTTGACG ACATGGCGCG GGTCTTTGGC GCCGGCCCCT TGCGGCGCTT TCTGTTCGTA
TCGGCCCGGC AGATTTCGGC GCAGCTGTTC CCGGCGCTGA TCCTGGCACT CGGCTCGGCC
TTCAAGGTCG CGATCATGGC GGAACTGCTG GCCAATGCCG GTGGCATCGG CGGCGCGCTG
GCGCGGGCGC GGGCCATGCT GGACATTGCC GAGGCGCTGG CCTGGGTCAG CCTGGCCGTC
GCCGCGCTGA TCGCTGTCGA ATACGTCCTG ATCCGTCCGG TCCGGGCCGA ACTGGAACGC
TGGCGCGAAG CCGCCGCACC CTGGGGCGTC AAGCGATGA
 
Protein sequence
MSLLAACLDR LARLGRFLWS AWAGLAGLAL IGALWQAGHE AYGDFILTAP LDTLAAAARL 
LHEGRAQELL ALTTARALAG FGLCALIGTL AGVAAGYSPA TLRLSRPVLT LLLGVPPIAW
IVLAMIWFGP SDMTVAVTIL ISATPVVFVG AVEGVVTRDR GLDDMARVFG AGPLRRFLFV
SARQISAQLF PALILALGSA FKVAIMAELL ANAGGIGGAL ARARAMLDIA EALAWVSLAV
AALIAVEYVL IRPVRAELER WREAAAPWGV KR