| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4160 |
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| Symbol | |
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| ID | 4582710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1316818 |
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| End bp | 1317756 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639771467 |
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| Product | SoxH protein-like |
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| Protein accession | YP_917920 |
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| Protein GI | 119386865 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.671969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.539982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGGC TGATCCTTTG CCTGATCGCC CTGCCCGCCC TGGCATCCGA GGACATTCCC
GACCAATATC CGCAATCGGT GCTGTATTCG AAGCCGGTCG AGGTGATCCC GCATGTCTTC
TCGGCCATCG GCGCCACGGC GCCGCCGACC TATGACAATG CCGGGCACAA CAACAACCTG
ACCTTCATCG TGACCGGCGA CGGCGTGATC GTGGTGAATG CGGGCGCCTC GTGGCAGTTG
GCCGAGGCGC TGCATGCCGA GATCCGCGCC GTCACCGACC AGCCGGTGAA ACTGGTCATC
AACGAGAACG GCCAGGGCCA TGCCATGCTG GGCAACGGCT ATTGGGCGGC GCAGGGCGTG
CCGATCCTGG CGCATGAGGA AGCCGCCGCC GAATTCGCGG ACGGTGCACC GCAGGACCTG
GCCAGCCTTC GAAACTATGC CCGGGAACGG GCCGAGGGCA CGGTGATCGC CCCTCCGACC
GAGACCTTCA CCGACCGCAA GGACATCGCC ATGGGCGGCG TCGCCATCGA GGTGCTGCAC
CTGGGCCCCG CGCATTCGCC CGGCGATACC CAGGTCTGGA TTCCGGAATG GTCGATGATG
ATCGCCGGCG ACATCGCCTT TCACGAGCGC ATGCCGCCGA TCTTCGAGGG CACCTGCACC
TCTTGCTGGA TCGAGACCTG GGAGACGAAA TTCGCGCCGC TCGCCCCGGC CCATGTCATT
CCCGGCCACG GCCATCCGAC GAATCTGGCG CAGGTCACGC ACCATACCCG CGACTATTTG
GCCGACCTGC GCGAAAAGAT CGGCGCACAT ATCGAGGAGG GCGGCGATCT GGCCGGCGCC
TATTACGTCG ACCAGTCGCG CTGGTCGCAT CTCGACACGT TCGAGGAACT GGCGACCAAG
AACGCCGGCG TGGTCTTTGC CGAGATGGAG TTCGAATAG
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| Protein sequence | MRRLILCLIA LPALASEDIP DQYPQSVLYS KPVEVIPHVF SAIGATAPPT YDNAGHNNNL
TFIVTGDGVI VVNAGASWQL AEALHAEIRA VTDQPVKLVI NENGQGHAML GNGYWAAQGV
PILAHEEAAA EFADGAPQDL ASLRNYARER AEGTVIAPPT ETFTDRKDIA MGGVAIEVLH
LGPAHSPGDT QVWIPEWSMM IAGDIAFHER MPPIFEGTCT SCWIETWETK FAPLAPAHVI
PGHGHPTNLA QVTHHTRDYL ADLREKIGAH IEEGGDLAGA YYVDQSRWSH LDTFEELATK
NAGVVFAEME FE
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