| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4144 |
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| Symbol | |
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| ID | 4582694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1300140 |
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| End bp | 1303574 |
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| Gene Length | 3435 bp |
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| Protein Length | 1144 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771451 |
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| Product | pyruvate carboxylase |
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| Protein accession | YP_917904 |
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| Protein GI | 119386849 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.407783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGTA AGATTCTTAT TGCGAACCGT GGCGAGATTG CGATCCGCGT GATGCGGGCT
GCGAACGAGC TTGGGAAGAA GACGGTCGCG GTCTATGCCG AGGAAGACAA GCTGAGCCTG
CACCGCTTCA AGGCGGACGA GGCCTACCGC ATCGGCGGCG GCCTGGGGCC GGTCGCGGCC
TATCTGTCCA TCCCCGAGAT CATCCGGGTG GCGAAGGAAT CCGGCGCCGA TGCGATCCAT
CCCGGCTATG GGCTTCTGTC CGAAAACCCC GATTTCGTCG ATGCCTGCAC CGCAGCGGGC
ATCGCCTTCA TCGGGCCGAG CGCCGACACC ATGCGGGCGC TTGGCGACAA GGCCAGCGCC
CGGCGCGTGG CGATCCAGGC CGGCGTGCCG GTGATCCCGG CCACCGAGGT GCTGGGCGAG
GACATGGAGG CGATCAAGCG TGAGGCGGCC GAGATCGGCT ATCCGCTGAT GCTGAAGGCC
AGCTGGGGCG GCGGCGGGCG CGGCATGCGC CCGATCATGG GCCCCGAGGA GCTGCCCGAG
AAGGTGCGCG AGGGACGGCG CGAGGCCGAG GCCGCCTTCG GCAACGGCGA GGGCTATCTG
GAAAAGATGA TCCTGCGCGC CCGGCACGTC GAGGTGCAGC TCTTGGGTGA TGGGCATGGC
GGGCTCTATC ACCTCTACGA GCGCGACTGC ACCGTGCAGC GCCGCAACCA GAAGGTCGTG
GAACGCGCCC CGGCGCCCTA CCTGACCCCC GAACAGCGCG CCGAGGTCTG CGAGCTGGCG
CTGAGGATCG GCCGCGCCGT CGGCTACCGC AACGCCGGCA CCGTCGAATT CCTGATGGAT
ATGGACAGCC AGGCCTTCTA CTTCATCGAG GTGAACCCGC GCGTTCAGGT CGAGCATACC
GTGACCGAGG AGGTCACCGG CATCGACATC GTGCAAAGCC AGATCCTGAT CGCCGAGGGC
GCGACGCTGG CCCAGGCCAC CGGCGTCGCC TCCCAGGCCG GGGTGCATCT GAACGGCCAC
GCCCTGCAAT GCCGGGTCAC GACCGAGGAT CCGCTGAACA ACTTCATCCC CGATTACGGC
CGCATCACCG CCTATCGCTC GGCCACCGGC AACGGCATCC GGCTGGACGG CGGCACCGCC
TATTCCGGCG GCGTCATCAC CCGCTATTAC GACAGCCTGC TGGTCAAGGT CACGGCGCAT
GCCCAGACGC CCGAGAAGGC CATCGCGCGG ATGGACCGGG CCTTGCGCGA GTTCCGGGTG
CGCGGCGTGG CGACGAATAT CGAATTCGTC ATCAACCTGC TGAAACACCC GACCTTCCTC
GACGACAGCT ATACGACTAA GTTCATCGAT ACCACGCCGG ACCTGTTCGC GTTCCGCAAG
CGCCGCGACC GGGCGACGAA ACTGCTGGTC TACATCGCCG ACATCACCGT GAACGGCCAT
CCCGAGACCG CCGGCCGGCC GCTGCCGCCG GCCGAGGCGC GCATTCCCGT GCCGCCTGCG
GCCAAGGCCG AGCCCGCCCC CGGCACGCGG CAGCTCCTGG AGGAACGGGG GGCGAAAGCC
GTCGCCGACT GGATGCTGGA CCAGAAGCGC CTGCTGATCA CCGACACCTC GATGCGCGAC
GGCCACCAGA GCTTGCTCGC CACGCGGATG CGCTCGATCG ACATGATCCG GGTGGCGCCG
GCCTATGCCG CGAACCTGCC CGGCCTCTTC TCGGTCGAAT GCTGGGGCGG CGCGACTTTC
GATGTCGCCT ATCGCTTCCT GCAGGAATGC CCCTGGCAGC GGCTGCGCGA CATCCGCGCC
CGCATGCCCA ACCTGATGAC GCAGATGCTG CTGCGGGCCA GCAACGGCGT CGGCTACACC
AACTATCCCG ACAATGTGGT GCAGGAATTC GTCCGCCAGG CGGCCAGGAC CGGCGTGGAC
GTGTTCCGGG TCTTCGACAG CCTGAACTGG ACCCCGAACA TGCGCGTCGC CATGGATGCG
GTGATCGAGG CCGGCAAGAT CTGCGAGGGC ACCATCTGCT ATACCGGCGA CCTGCTCGAT
CCCGCGCGCG CGAAATACGA CCTGCAATAT TACCTGAAGA TGGCGCGCGA GTTGCGCGAC
GCCGGCGCGC ATGTGCTGGG GCTGAAGGAC ATGGCGGGGC TGCTGAAACC CGCCTCGGCC
GGCATTCTGG TCCGCGCGCT GAAGGAAGAG ATCGGCCTGC CGGTGCATTT CCACACCCAT
GACACCGGCG GCATTGCCGG CGCCTCGATC CTGGCCGCGG CCGAGGCCGG GGTGGATGCG
GTGGACTGCG CCATGGACGC CTTTTCCGGC AATACCTCGC AGCCCTGCCT GGGCTCGGTG
GTCGAGGCGC TGCGCCACAC CGATCGCGAC ACCGGCCTGG ATATCGAGGC GATCCGCCGG
ATCTCGAACT ACTGGGAGGC GGTGCGCGAG CACTATGCCG CCTTCGAGAG CGGCTTGCAG
GCCCCGGCCT CGGAGGTCTG GCTGCACGAG ATGCCCGGCG GCCAGTTCAC CAATCTCAAG
GCCCAGGCGC GCTCGCTCGG CCTTGAGGAT CGCTGGCACG AGGTCGCCCA GGCCTATGCC
GAGGTGAACC GGATGTTCGG CGACATCGTC AAGGTCACGC CCAGTTCCAA GGTGGTGGGC
GACATGGCGC TGATGATGGT GGCGCAGGGG CTGACGCGGG CGCAGGTCGA GGACCCGGCG
GTCGAGGTCT CCTTCCCCGA CAGCGTCGTC GACATGATGC GCGGCAACCT GGGCCAGCCG
CCCGGGGGCT GGCCGGCGGC GTTGCAGAAG AAGGTCTTGA AGGGCGAGCC AGCCCTGACC
GCCCGCCCCG GCGCGGCCAT GCCGCCGGTG GATATCGAGG CCACCCGCGC CGAGCTGATC
CGCCAGCTGG AAGGCAAGGC GGTCGACGAC GAGGACCTGA ACGGCTACCT GATGTATCCC
AAGGTCTTCC TCGACTACAT GGGCCGGCAC CGGCAATACG GCCCGGTGCG GACGCTGCCG
ACGCGGACCT TCTTCTACGG CATGGAGCCG GGCGAGGAGA TCGAGGCCGA GATCGACCCC
GGCAAGACGC TGGAGATCCG GCTGCAGACC GTGGGCGAGA CCGACGAGAA GGGCGAGGTC
AAGGTGTTCT TCGAGCTGAA CGGCCAGCCC CGGGTGATCC GGGTGCCGAA CCGTCTGGTC
AAGTCGCAGA CCGCCGCCCG TCCCAAGGCC GACCCGGCGA ACGAGGGCCA CCTGGGCGCG
CCCATGCCCG GCGTCGTCGC CTCGGTCGCC GTCACCCAGG GGCAGAAGGT CAATCCCGGC
GACCTGCTGC TGACCATCGA GGCGATGAAG ATGGAAACCG GCATCCATGC CGACAGAGCC
GGCGTCATCA AGGCGCTGCA CGTCAGGCCG GGAGAGCAGA TCGACGCGAA GGATCTCATG
GTCGAGATGG AGTGA
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| Protein sequence | MFRKILIANR GEIAIRVMRA ANELGKKTVA VYAEEDKLSL HRFKADEAYR IGGGLGPVAA
YLSIPEIIRV AKESGADAIH PGYGLLSENP DFVDACTAAG IAFIGPSADT MRALGDKASA
RRVAIQAGVP VIPATEVLGE DMEAIKREAA EIGYPLMLKA SWGGGGRGMR PIMGPEELPE
KVREGRREAE AAFGNGEGYL EKMILRARHV EVQLLGDGHG GLYHLYERDC TVQRRNQKVV
ERAPAPYLTP EQRAEVCELA LRIGRAVGYR NAGTVEFLMD MDSQAFYFIE VNPRVQVEHT
VTEEVTGIDI VQSQILIAEG ATLAQATGVA SQAGVHLNGH ALQCRVTTED PLNNFIPDYG
RITAYRSATG NGIRLDGGTA YSGGVITRYY DSLLVKVTAH AQTPEKAIAR MDRALREFRV
RGVATNIEFV INLLKHPTFL DDSYTTKFID TTPDLFAFRK RRDRATKLLV YIADITVNGH
PETAGRPLPP AEARIPVPPA AKAEPAPGTR QLLEERGAKA VADWMLDQKR LLITDTSMRD
GHQSLLATRM RSIDMIRVAP AYAANLPGLF SVECWGGATF DVAYRFLQEC PWQRLRDIRA
RMPNLMTQML LRASNGVGYT NYPDNVVQEF VRQAARTGVD VFRVFDSLNW TPNMRVAMDA
VIEAGKICEG TICYTGDLLD PARAKYDLQY YLKMARELRD AGAHVLGLKD MAGLLKPASA
GILVRALKEE IGLPVHFHTH DTGGIAGASI LAAAEAGVDA VDCAMDAFSG NTSQPCLGSV
VEALRHTDRD TGLDIEAIRR ISNYWEAVRE HYAAFESGLQ APASEVWLHE MPGGQFTNLK
AQARSLGLED RWHEVAQAYA EVNRMFGDIV KVTPSSKVVG DMALMMVAQG LTRAQVEDPA
VEVSFPDSVV DMMRGNLGQP PGGWPAALQK KVLKGEPALT ARPGAAMPPV DIEATRAELI
RQLEGKAVDD EDLNGYLMYP KVFLDYMGRH RQYGPVRTLP TRTFFYGMEP GEEIEAEIDP
GKTLEIRLQT VGETDEKGEV KVFFELNGQP RVIRVPNRLV KSQTAARPKA DPANEGHLGA
PMPGVVASVA VTQGQKVNPG DLLLTIEAMK METGIHADRA GVIKALHVRP GEQIDAKDLM
VEME
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