| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4128 |
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| Symbol | |
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| ID | 4582678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1282421 |
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| End bp | 1284679 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771435 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_917888 |
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| Protein GI | 119386833 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.43986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGGAA CGCTGTCCAA GGGCACATGG GAACGCGTCG CACGGCTGCG GCGCCTGCGG
CTCTATCGCA ATACCGCAAC GCTTGGCCTT GCCCTGCTGG GGCCGGCGCT GGCTGGGCTG
ACCTTTGCGG TGATGGGGCC GTTTGCCGAT TCAACCTCGG GCGGCACGGT GCTGCGGCTG
GTGCTGCTGG CGGACCTGCT TTACCTGATC GTGCTGACCG GGCTTGTCGT GGCGCGCATG
GCGCAGATCG TCGCGGCGCG GCGCAAGTCG GCCGCAGGCT CGCGGCTGCA CATGCGGCTG
GTGGGCGTCT TTGCCACCAT CGCGCTGGTG CCGACCGTGC TGGTCGCGCT GTTCGCCGGG
CTGACGGTGA ATATCGGGCT GGAGGGCTGG TTCTCGAACC GGGTGCAGCA GGTGGTTTCG
ACCTCGCTGG CGGCGGCCGA GGCCTATCAG GACGAGCATC GCCGAGACTT GACCAACGAC
GCCAAGCTGC TTGCGGGCGC GCTGACCCAG GCGGCGCGGC AGAACCCGAT GCTGGACGAT
GGCGAGTTGC GGCTGCTGCT GGGGCAGGGC CAGGCGCTGA TCCAGCGGGG CCTGCGCGAA
GCCTATGTCA TCGACGGCCG CGGCACGATC CGCGCGCGCG GCGAGCGCAG CTACCAGTTC
TGGTATGAGG AGCCCTCGCC CGTCCAGTTC GACGAGGCGG CGACCCGCGG GCTGGTGCTG
ATCGAGGATT GGCAGAACAA CGAGTTCCGC GCCCTGGTGC CGCTGGTGCC GCTGGCCGAT
CGCTACCTTT ACGTCACCCG CGACGTGGAC GGCAGCCTTT TGGGCCTGCT GGACGACACC
CGGCAGACCG TCGGCGACTA TCAGCGGCTG GAGCAGGAGC GCGGCCGGGT CCTGTTCGAG
TTTTCCCTGC TTTATCTTGG GTTTGCGCTG CTTCTGGTGG CGGCGGCGAT GTGGCTGGGC
CTGTGGTTCG CCGACCGGCT GTCGCGGCCC ATCGGCCGGC TGGCCGAGGC ATCCGAGCAG
GTGGGCGAGG GCAACCTGGA CTTCCAGATC CCCGCGCCCG ACACCGGCGA CGAGATCCAG
ACCTTGGGCG AAAGCTTCAA CCGCATGACC CGGCAGCTCA AGCAACAGCG GCAGGAGCTG
GTCGAAAGCT ACCGAGCCGC CGACGACCAG CGCCGGCTGT TCGATTCCGT GCTGTCCTCG
GTCACTGCCG GGGTGATCGG CCTCGATGCG GCGGGCGAGA TCGATTTCCT GAACCGTTCG
GCCACCCGGC TTCTGGGCCT GGATCCGGCG ACGGCGCATG ACCGGCTGCT GTCCGAGGCG
GTGCCGGAAT TCGCGCCGCT CTTCGAACGG CTGGCGCAGT CGGTCAATGA ATCGGTGCAG
GACGAGATCC GCCTGACGCG CGAGGGCAGG GTGGAAAGCC TGCTGGTCCG CATGGCGATC
CGCCGCGGCG CGGCCGGCGG GCTGGAGGGC TATGTGGTGG CGCTGGACGA CGTGACCGAC
CTGGTCTCGG CGCAGCGCAT GGCGGCCTGG GGCGACGTGG CCCGCCGCGT GGCGCATGAG
ATCAAGAACC CGCTGACCCC GATCCAGCTT TCGGCCGAGC GGCTGAAGCG CAAGTTCGGC
CCCATCGCCG GTGAGGAACG CGAGGCGCTG GAGCAATATA CCGAGGTCAT CATCCGCCAG
ACCAACGACC TGCGCCGGAT CGTCGACGAA TTTTCGCGCT TCGCCCGCAT GCCCGAGCCG
GACCGCAAGG AAACCGACAT CGCCAAGCTG CTGCGCGATG CCGAACTGAT GCAGCGCGAC
GCACTGCAAG GGGCTCTGGT CTCGGACATC CCCGACGAGC CGGTGATCGT CGATGCCGAT
GCCGGCATGA TGCGGCAGGT CTTTACGAAC CTGTTGAAGA ATGCCGGGGA GGCCATTGAC
GAGTTGCGGG AAAATCCACC GGAAGATTGG ACTCCCCAGG TCCATGTCAA GCTGCGCGTG
GCCCCGGATT CCGTTGCCAT CCGCATCACC GACAACGGTC CCGGCCTGCC GGACGACCGC
ACCCGGCTGT TCGAGCCCTA CGTCACGATG AAACCCGGCG GCACCGGCCT CGGCCTGCCG
ATCGTCAAGA AGATCGTCGA AGAGCACGGC GGCAGCCTGA TGCTGACCGA TGCCCCCGAG
GGCCGCGGCG CCATGGCCGA GATCCGTCTG CCGCGCGAGC GCCAGCCGGT GCGCCTGTCC
GCGCGCCGCC ACAAACACGA GCAGGAAACA CTGAAATGA
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| Protein sequence | MAGTLSKGTW ERVARLRRLR LYRNTATLGL ALLGPALAGL TFAVMGPFAD STSGGTVLRL
VLLADLLYLI VLTGLVVARM AQIVAARRKS AAGSRLHMRL VGVFATIALV PTVLVALFAG
LTVNIGLEGW FSNRVQQVVS TSLAAAEAYQ DEHRRDLTND AKLLAGALTQ AARQNPMLDD
GELRLLLGQG QALIQRGLRE AYVIDGRGTI RARGERSYQF WYEEPSPVQF DEAATRGLVL
IEDWQNNEFR ALVPLVPLAD RYLYVTRDVD GSLLGLLDDT RQTVGDYQRL EQERGRVLFE
FSLLYLGFAL LLVAAAMWLG LWFADRLSRP IGRLAEASEQ VGEGNLDFQI PAPDTGDEIQ
TLGESFNRMT RQLKQQRQEL VESYRAADDQ RRLFDSVLSS VTAGVIGLDA AGEIDFLNRS
ATRLLGLDPA TAHDRLLSEA VPEFAPLFER LAQSVNESVQ DEIRLTREGR VESLLVRMAI
RRGAAGGLEG YVVALDDVTD LVSAQRMAAW GDVARRVAHE IKNPLTPIQL SAERLKRKFG
PIAGEEREAL EQYTEVIIRQ TNDLRRIVDE FSRFARMPEP DRKETDIAKL LRDAELMQRD
ALQGALVSDI PDEPVIVDAD AGMMRQVFTN LLKNAGEAID ELRENPPEDW TPQVHVKLRV
APDSVAIRIT DNGPGLPDDR TRLFEPYVTM KPGGTGLGLP IVKKIVEEHG GSLMLTDAPE
GRGAMAEIRL PRERQPVRLS ARRHKHEQET LK
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