| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4127 |
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| Symbol | |
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| ID | 4582677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1281036 |
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| End bp | 1282424 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771434 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_917887 |
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| Protein GI | 119386832 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.142345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.982236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA TTCTGATTGT CGATGACGAG CGGGACATCC GCGAACTGAT TTCCGACATC
CTGCGCGACG AGGGCTTCTC GACCCGCCTC GCCGCCAATT CCGACCAGGC GGTGGCCGAG
CTGAACGCGG CCGAGCCGGC GCTGATGATC CTCGACATCT GGCTCAAGGA TAGCAAGATG
GACGGGATCG ACATTCTCAA GCAGGTCAAG CGCAACAACC CGGACGTGCC GGTGGTCATC
ATCTCGGGCC ACGGCAATAT CGAGATCGCG GTGGCGGCGA TCAAGCAGGG CGCCTACGAC
TTCATCGAGA AGCCCTTCAA CATCGACCAG TTGCTGGTGG TGATCCGCCG CGCCATGGAG
ACGGCGCGCC TGCGCCGCGA GAACGCGACG CTGAAGCGCG GCGAGGCACG GGCGGCCGAG
ATGCTGGGCA ATTCGGCGCC CTTCCGCAGG CTGCGCGAAC AGCTCGACAA GGTGGCGAAA
TCGAACGGCC GGGTGATGCT GACCGGCGAG CCGGGGGCGG GCAAGGAGAT CGCCGCGCGC
TATGTCCACG CCCAGAGCCC GCGGGCGCGC GAGCCCTTCG TCACCGTGCC CTGCGCCACC
ATCGAGCCCG AGCACATGGA GGAGGTGCTG TTCGGCCGCG AGACCGCCGA ACGCGGCATC
GAGCCGGGCC TGCTGGAGCA GGCGCATGGC GGGGTGATCT ATTTCGACGA GGTGGCGGAC
ATGCCGCTGG GCACCCAGCC CAAGATCCTG CGCGTGCTGA CCGAGCAGCA GTTCCAGCGC
GCCGGCGGCA CTGACAAGGT GCGGGTGGAT CTCAGGGTGA TTTCCTCGAC CAATCGCGAC
CTTGCGGCCG AGATCGCCGC CGGCCGCTTC CGGCAGGAAC TCTACGACCG GCTGAACGTG
GTGCCGGTGG CGGTGCCCTC GCTTGCGGAG CGCCGCGACG ACATCCCGAT GCTGGCCACG
CATTTCATCG AACTGTTCCA CGCCAGCCAG GGCCTACCGC AGCGTGCCCT GCCCGAGGAA
ACCAGTGCCG CGCTGCAGGC GATGAACTGG CCGGGCAATA TCCGCCAGCT GCGCAACGTG
ATCGAGCGCG TGCTGATCCT GGGCGACGGG ACCGGGCCGA TCCAGCCCTC GGAACTGGAA
AGCCAGAATG GCAGCGCCGG CACCAGCGAG GCCTTAGCGC TCGGCCCGCA GATCACCAGC
CTGGCGCTGC GCGAGGCCCG CGAGCTTTTC GAGCGCGAAT ACCTGCTGGC GCAGATCAAC
CGCTTCGGCG GCAATATCAG CCGCACGGCG CAATTCGTCG GCATGGAGCG CTCGGCGCTG
CATCGCAAGC TCAAGTCGCT GGGCGTCGTC GGGGGCATGC GCGTCGAGGA GGAGATGATG
GGGAAATGA
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| Protein sequence | MSDILIVDDE RDIRELISDI LRDEGFSTRL AANSDQAVAE LNAAEPALMI LDIWLKDSKM
DGIDILKQVK RNNPDVPVVI ISGHGNIEIA VAAIKQGAYD FIEKPFNIDQ LLVVIRRAME
TARLRRENAT LKRGEARAAE MLGNSAPFRR LREQLDKVAK SNGRVMLTGE PGAGKEIAAR
YVHAQSPRAR EPFVTVPCAT IEPEHMEEVL FGRETAERGI EPGLLEQAHG GVIYFDEVAD
MPLGTQPKIL RVLTEQQFQR AGGTDKVRVD LRVISSTNRD LAAEIAAGRF RQELYDRLNV
VPVAVPSLAE RRDDIPMLAT HFIELFHASQ GLPQRALPEE TSAALQAMNW PGNIRQLRNV
IERVLILGDG TGPIQPSELE SQNGSAGTSE ALALGPQITS LALREARELF EREYLLAQIN
RFGGNISRTA QFVGMERSAL HRKLKSLGVV GGMRVEEEMM GK
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