| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4122 |
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| Symbol | |
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| ID | 4582672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1274606 |
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| End bp | 1275613 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639771429 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_917882 |
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| Protein GI | 119386827 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.352086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACTC GTCGCAGTTT TGCCGCAATG GCTGGGGCCG CCATCATCGC CTTGTCCACC
GCCATGCCGG CACTGGCGCA GAACCCCATC GTCATCAAGT TCAGCCATGT CGTCGCGCCC
GATACGCCGA AGGGCAAGGC GGCCGTCAGG TTCAAGGAAC TGGCGGAGCA GTATACCGAC
GGCGCGGTGA AGGTCGAAGT CTATCCCAAC AGCCAGCTCT ACAAGGACAA GGAAGAACTC
GAGGCCCTGC AACTGGGTGC GGTGCAGATG CTGGCGCCGT CGCTTGCCAA GTTCGGGCCG
CTGGGGGTGC CGGAATTCGA GCTGTTCGAC CTGCCCATGC TGTTCAAGGA TCGCGACGAC
CTGCGCAAGA TCACCGAGGG CGAGATCGGC GATGCCCTGC TGGGGAAACT GGAGGCCAAG
GGCATCATCG GGCTCGCCTA TTGGGACAAT GGCTTCAAGA TCATGACCGC CAATTCGCCG
CTGGTCCATC CCGACGATTT CCTGGGCCTG AAGATGCGCA TCCAGTCCTC GAAGATCCTG
GAGGCGCAGT TCGAGGCCCT TGGCGCCGTG CCCCAGGTCA TGGCCTTTTC CGAGGTCTAC
CAGGCGTTGC AGACCGGCGT CGTGGACGGG ACCGAGAACA CGCCGTCGAA CACCTATACG
CAGCGCGTCA ACGAGGTGCA GAAATACGGC AATGTCTCCA ACCACGGATA TATCGGCTAT
GCCGTCATCG TGAACAAGGC GTTCTGGGAC GGGCTGGACG AGGGCGTGCG CGCCGATCTG
GAAAAGGCGA TGGCCGAGGC GACGGCCTAT GCCAATGACA TCGCCGAAGA CGAGAACGCC
ACCGCCCTGC AAGCCATGCG CGATGCCGGA AAAACCGAAT TCCACGACAT GACCGAGGCA
GAGCGTGCCG AATGGTTCGA GGTGCTCAAG CCCGTGCATG AGAGCATGGC AAAGCGGGTC
GGTGCGGATC TTATCCGGCA AACCTATACC GCACTCGGGA TCGAGTGA
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| Protein sequence | MFTRRSFAAM AGAAIIALST AMPALAQNPI VIKFSHVVAP DTPKGKAAVR FKELAEQYTD
GAVKVEVYPN SQLYKDKEEL EALQLGAVQM LAPSLAKFGP LGVPEFELFD LPMLFKDRDD
LRKITEGEIG DALLGKLEAK GIIGLAYWDN GFKIMTANSP LVHPDDFLGL KMRIQSSKIL
EAQFEALGAV PQVMAFSEVY QALQTGVVDG TENTPSNTYT QRVNEVQKYG NVSNHGYIGY
AVIVNKAFWD GLDEGVRADL EKAMAEATAY ANDIAEDENA TALQAMRDAG KTEFHDMTEA
ERAEWFEVLK PVHESMAKRV GADLIRQTYT ALGIE
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