| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4117 |
|---|
| Symbol | |
|---|
| ID | 4582667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 1269315 |
|---|
| End bp | 1270067 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639771424 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_917877 |
|---|
| Protein GI | 119386822 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0846884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.805423 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACC CGAATCCACT GGAAAAGCCG GAAGATCTCC TGGCCCGGGC ACGCTCGGTA
AGCTCCGATA CGGCGGGCGT CCTGATCACC AGCCTGCGCG AGGCAAGGTC GCGGCGCATC
CTGGAACTGG GTTGCGGCGA TGGCACGATC ACCGCCCTGC TGCACGAGGC GGGCTTCGAC
GTTACCGGAC TGGACCCTTC GGCCGAGGCG CTGGCGCGCG CCCGTGCCCG CTTGCCGTCG
GTCACCTTTA TCGAAGCGCA TGCCGAGGCG CTGCCCGAGT TGCGCCCCTT CGATGCGGCC
TGTTTCGTCA ACGCGCTGCA TCATGTGGAA CCTCCCGCCA TGACCGGCGC CGTCCTGAAT
GCGCTGTCCG TCCTGCGTCC GGGGGGGCTG CTTCATGTTG TCGAACCCCT TGCCACGGGC
AGCTTCTTTC GCGCCATGCG CCCGGTCGAG GATGAATCCG CCATCCGGCA AAAAGCGGTG
CAAGCCGTCG AGTCCCTGAT TTCCGAGGGG CGGATCGTGT TGCGGGATCT CCGCCGCTGG
ACCCGCGAAA GCCGGTTCCG CGACCTGGAG GAGTTCGTGG ATTACCTGGC CCGCGTCGAT
CCCGATCGCG CGGCGCTGGC GCAAGGCAAT GCCGCGGCGC TGGCGCGGGC ATGGCGCGAC
AACATCCGCG TCCGGGACGG CAAGGCGGTG CTCGTCCAGC CCCTGGTCTG CTGGACGCTG
GCGCGGGCCG AGGATTCCGG GGGGCGACCA TGA
|
|---|
| Protein sequence | MQHPNPLEKP EDLLARARSV SSDTAGVLIT SLREARSRRI LELGCGDGTI TALLHEAGFD
VTGLDPSAEA LARARARLPS VTFIEAHAEA LPELRPFDAA CFVNALHHVE PPAMTGAVLN
ALSVLRPGGL LHVVEPLATG SFFRAMRPVE DESAIRQKAV QAVESLISEG RIVLRDLRRW
TRESRFRDLE EFVDYLARVD PDRAALAQGN AAALARAWRD NIRVRDGKAV LVQPLVCWTL
ARAEDSGGRP
|
|---|
| |