| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4109 |
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| Symbol | |
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| ID | 4582660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1261944 |
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| End bp | 1263161 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639771418 |
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| Product | putative sulfonate/nitrate transport system substrate-binding protein |
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| Protein accession | YP_917871 |
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| Protein GI | 119386816 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCCG GGGCGATTTT CGGCGTGATC CGGATCCGGT CCCTGTCGAT TGCGGGATGG
GGCTTTGCGC GATTCGAGAA AATTCTTGTC GTCCGGGGCG GGTTCCGGGA AAGCGGAATC
CATTCTCGGC GGGTCTGGAA TAACAGGCAC ACCAAATATT CACGATCAAC CAAATCGAGA
TTGAACTCGC GCCGGGCAGA ACCAAAAATC CCCGCAGAAC TCTGCAAGGG ATGTCCAGTT
TTGCCACGGA TCATGACCAG GATCGCCGCC GTCGCAGCCT CTGTCCTGCT GCTCGCCTCG
CCTGTGACGG CGCAGGAGGT GCCGCCGGGC ACGAAGCTTG TCGTCGCCGA TCAGAGCGAG
CTTTTCGCCA ACCTGCTGAA GGCCAGCGGT GCGGCCGGTG AAATCACCTT CGGCCTTGAG
CTGCCGAACT TTGCCGGGGG GCCGGCCATT CTGGAGGCGA TGCGTGCCGG AGCGCTGGAT
CTGGCCTATG TCGGGGATAC GCCGCCCATT CAGGCCCGCG CCTCGGGCAC GCTGCTGCCG
ATCGTGGCGA CGGTCGACCG CGAACGCTCG GAATACTGGC TGACCGCGCG GCCGGGGCTG
GAGATCGGGA AGCTTTCGGA CCTGAGGGGC AAGCGGGTCA GCTATATCGA AGGGTCGGGG
CGTCAGGCCT ATCTGATCGA GGCGCTGAAC CGTGCGGGTT TGACGCTGAA GGACATCCAG
CCCGTGCCGC TGCGCGTCGC CGACCTGCCG GACGCGATCC GCACGAATGC CGTGGACGTG
GCGGTGCTTC AGGAGCCGCA TGTTACCCGG CTGGAAAAGC AGATCGGCGC AAGCCGTGTC
GCCGATCCCG AGGAGCGCAA GCTGCTGCCC GGGACATGGT ATTTCTATGC CCGCCCCGAG
GCGCTCGACG ATCCGGCAAA GGCCGCCGCC ATCGGCGAGT TCATCAAGGC GGCGATCCAT
TCCGTCAACT GGATGAATGA AAACCGCGAG GACTGGGGCA AGGCCTACTA CACCGACTAT
CAGCGGCTTG CGCCCGAAGA TACCGCGGCC GTCCTGGCCG CGCAGGCGCC CGCGCGTTTC
CAGACCTCGA CCGAGGCCGT CGCCCATCAC CAGAAGCTGG TGGACCTGCT TTACGAAGCC
GGCGAGTTGC CCGAGCGCTT CGATGCCGCG GGCTCGTTCG TCGCATCCTA TGACGACCTG
ATTGCCGCAG AGCGCTGA
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| Protein sequence | MGSGAIFGVI RIRSLSIAGW GFARFEKILV VRGGFRESGI HSRRVWNNRH TKYSRSTKSR
LNSRRAEPKI PAELCKGCPV LPRIMTRIAA VAASVLLLAS PVTAQEVPPG TKLVVADQSE
LFANLLKASG AAGEITFGLE LPNFAGGPAI LEAMRAGALD LAYVGDTPPI QARASGTLLP
IVATVDRERS EYWLTARPGL EIGKLSDLRG KRVSYIEGSG RQAYLIEALN RAGLTLKDIQ
PVPLRVADLP DAIRTNAVDV AVLQEPHVTR LEKQIGASRV ADPEERKLLP GTWYFYARPE
ALDDPAKAAA IGEFIKAAIH SVNWMNENRE DWGKAYYTDY QRLAPEDTAA VLAAQAPARF
QTSTEAVAHH QKLVDLLYEA GELPERFDAA GSFVASYDDL IAAER
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