Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4107 |
Symbol | |
ID | 4582658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1260347 |
End bp | 1261075 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771416 |
Product | ABC transporter related |
Protein accession | YP_917869 |
Protein GI | 119386814 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC ATCGCGCCAT CAGCCCGGCC GTTGCCGTCC GCCGCCTGTC GCGCGCCTTC GGGGACAGGC CCGTGCTGCA CGACATCACG TTGAACATCC CCAGCGGCCA GTTCGTGGCG CTGCTGGGCG AATCCGGCTC GGGCAAGACC ACGCTGCTCC GGGCGCTTGC GGGGCTGGAT GACGATGCCC GGCAGTCGGG CAGCTACAGC GTGCCCAAGA ACGTCTCGGT CCTGTTTCAG GACGCGCGCC TGTTGCCGTG GCTCAGCGTC ATCGACAACC TGACGCTTGG CCTCAGGCGA CAGGATGCGG TGCAGGCCGC GCAGTCCATG CTGGACAGCG TCGGCATCGG CGACAAGGCG CGGGCCTATC CGGCCACGCT GTCCGGGGGG CAGAAACAGC GCGCGGCCCT TGCTCGCTCG CTTCTGCGCA ACCCCGATCT GCTGCTGGCG GATGAACCCT TCGGGGCGCT GGATGCGCTG ACACGGCTGA AGATGCACGA CCTGCTGCTG CGGCTGGTCG AACGCAGCCG CCCGACCATC GTCCTCGTGA CCCATGACGT GGACGAGGCG GTGCTGCTGG CCGACCGCAT CCTGGTGCTG CGCGACGGCG TCATCGCCGA GGATCACCGC GTGACCGTGC CGCATCCGCG GCGCCCCAGC CATCCCGATT TCGAGGATCT GCGCCGCCGG CTGCTGCGCA GCCTGGGGGT CGAAACCGAA CATATCTGA
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Protein sequence | MTLHRAISPA VAVRRLSRAF GDRPVLHDIT LNIPSGQFVA LLGESGSGKT TLLRALAGLD DDARQSGSYS VPKNVSVLFQ DARLLPWLSV IDNLTLGLRR QDAVQAAQSM LDSVGIGDKA RAYPATLSGG QKQRAALARS LLRNPDLLLA DEPFGALDAL TRLKMHDLLL RLVERSRPTI VLVTHDVDEA VLLADRILVL RDGVIAEDHR VTVPHPRRPS HPDFEDLRRR LLRSLGVETE HI
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