| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4103 |
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| Symbol | rplU |
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| ID | 4582654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1256537 |
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| End bp | 1256959 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639771412 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_917865 |
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| Protein GI | 119386810 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.509637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGCAG TTCTCAAGAC GGGCGGCAAG CAATACCGGG TTCAGGCCGG TGACGTGCTG
CGCGTCGAAA AGCTGAACGC CGAAGCAGGC GACAAGGTCC AGTTCAACGA CGTGCTGATG
ATCGGCTCGG CCGTCGGCGC GCCGCTGGTC GCGGGCGCGG CCGTGCAGGC CGAAGTCATC
GACACCATCA AGGCCGACAA GGTCATCACC TATGTCAAGC GTCGCCGGAA GCACTCCTCG
CAGCGCACCC GGGGCCACCG CCAGCAGTTG ACGCTGGTCC GCATCACGGA CCTGCTTGAA
AAAGGCGGCG ACAAGTCCGG CGTGAAGCCT GCCGTCGGCG CCCGCACCAA GATCGAGCCG
GCCGTCAAAC CGGCGAAAGC CAAGAAGTCG GAAGCCGAAG CCTCGGCCGA AGACGCCAAC
TGA
|
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| Protein sequence | MFAVLKTGGK QYRVQAGDVL RVEKLNAEAG DKVQFNDVLM IGSAVGAPLV AGAAVQAEVI
DTIKADKVIT YVKRRRKHSS QRTRGHRQQL TLVRITDLLE KGGDKSGVKP AVGARTKIEP
AVKPAKAKKS EAEASAEDAN
|
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