| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4098 |
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| Symbol | mnmA |
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| ID | 4582649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1253056 |
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| End bp | 1254225 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771407 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_917860 |
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| Protein GI | 119386805 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGC CAAGCCTCTC TCTGCGCCAT GCCGCGCCAT ATTCGACCGT CAATTCGCTG
GGCTTTCCCA AGCCGCCGGC GCAGACGCGC GTGGTCGTCG CGATGTCGGG GGGCGTGGAC
AGCTCGGTCG TCGCCGCGAT GCTGGCCGCG CAGGGCTACG ACGTGATCGG CGTGACCTTG
CAGCTTTACG ACCACGGTGC GGCGCTGGCA AAAAAGGGGG CATGCTGCGC CGGGCAGGAC
ATCCACGACG CGCGCCGCGT GGCCGAACGC ATCGGTTTCC CGCATTACGT CCTGGATTAC
GAGAACAAGT TCCGCGAATC GGTGATCGAG GAATTCGCAG ACGCCTATCT GGCCGGCGCC
ACCCCGGTGC CCTGTATCCG CTGCAACGAG CGGGTGAAGT TCCGCGACCT GTTGCAGACC
GCGCGCGAGC TCGATGCCGA TTGCATGGCG ACCGGGCATT ACATCCGCCG CCTCATGGGT
CCGAAGGGCG CCGAGTTGCA CATGGCCGCC GACCCGGCCC GGGACCAAAG CTATTTCCTG
TTCTCGACCA CGCAGGAGCA GCTGGATTTC CTGCGCTTCC CGCTGGGGGG GCTGGCCAGC
AAGGCCGAAA CCCGGGCGCT GGCGGCGCAA TACGGGCTCG CGGTCGCCGA CAAGCCCGAC
AGCCAGGACA TCTGCTTCGT GCCGAACGGC GATTATGCCA GCGTGATCGA GAAGCTGCGC
CCCGGCGCCG CCGATCCGGG CGAGATCGTG GACATGGACG GCAATGTGCT GGGCAGCCAT
CGCGGCGTGA TCCATTACAC CATCGGCCAG CGCCGCGGCC TTGGCATCGG CGGCCTGGGC
GATCCGCTCT ATGTCGTGCG GCTGGAGCCC GATACCCGGC GCGTCGTCGT CGGCCCCAAG
CAGGCGCTGG CGACGAAGAT CGTGCCGGTG ACCGAGGTCA ACTGGCTGGG CGACGAGCCC
TTCGAGGACG AGATCGCCGT CACCGCCCGT ATCCGCTCGA CCCGCCCGCC GCGCCCTGCC
ATCCTGCGCG TGACCGGCAA GCACCGGGCC GAGATCGAGC TGCTGGACCC GGAGGAAGGC
GTCAGCCCCG GCCAAGCCTG CGTGTTCTAT GCCACCGAAG GCAGCCGCGT GTTGGGCGGC
GGCTGGATCT CGCACCGGCG CGGCGGCTGA
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| Protein sequence | MTAPSLSLRH AAPYSTVNSL GFPKPPAQTR VVVAMSGGVD SSVVAAMLAA QGYDVIGVTL
QLYDHGAALA KKGACCAGQD IHDARRVAER IGFPHYVLDY ENKFRESVIE EFADAYLAGA
TPVPCIRCNE RVKFRDLLQT ARELDADCMA TGHYIRRLMG PKGAELHMAA DPARDQSYFL
FSTTQEQLDF LRFPLGGLAS KAETRALAAQ YGLAVADKPD SQDICFVPNG DYASVIEKLR
PGAADPGEIV DMDGNVLGSH RGVIHYTIGQ RRGLGIGGLG DPLYVVRLEP DTRRVVVGPK
QALATKIVPV TEVNWLGDEP FEDEIAVTAR IRSTRPPRPA ILRVTGKHRA EIELLDPEEG
VSPGQACVFY ATEGSRVLGG GWISHRRGG
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