Gene Pden_4093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4093 
Symbol 
ID4582644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1247883 
End bp1249376 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content64% 
IMG OID639771402 
Producthypothetical protein 
Protein accessionYP_917855 
Protein GI119386800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.877124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATG ATCTTCTGAA AGCGGCGCTT CTCGAAAAGG CCAAGCGCGA ACTGGCGGCA 
AGGCAGGCAA AGGCGGATCG CCCCCAGCCG GGCAGCCTGC TGGATTTCCC GCAGGTGGAG
CCGCAGCCGA ACGTCGCGCA GGACATGGCC GCCGCAGGTG CCGCTGGCGC CGCTCGTGGC
ACAACCGGAA TGCTGGACCT GCCGGGGATG ATCTTCGGTG CTGGCAGCCG GGCCGGATCT
TGGGTGGCCG AGAAAACCGG CCTCGCATCG CCGGAGGAAG CGCAGGCCGC GCATCAGATG
GCGACCGGAG TGGCCGATCA ATCGCGCTTC GGATCGGGCG ACAAATACCG TCAGGCAGCC
GCAGAGGCCA CGGGCGGGGC GACCGAGTTC CGAGGCGAAA CCACCGCCGG CAAATATGCT
GGCACGGTCG GGGAGTTTCT GCCCGGCTCG CCGTTTGGCG GCGGCAACCT TCTGCGCAAT
GCGCTGGTCT ATGGCGTGGT GCCCGGCCTT GCATCCGAGG GCGCGGGCCA ATTGACCGAG
GGGACCGCCT ATGAGCCGTG GGCAAGGGCC ATCGCGCCGA TGGTGGCAAG CGGTGTGGTT
GCTGCGGCAA CCCGCCCGAG AGGCCCGCAG GCGCCGAGCG TGGACGATCT GAAAGCGCAG
GCCGAGGGGC TGTATCAGAC CGGCGCGGCG CGTGCTGGCG CTGACCCCGC ATCAGTGCAG
GGCTTGGCAT CCCAGATCGA CAACGAGTTG CAGGCACTGA ACGTCAAGAC GCCCGCCGGT
CGCGTGGTTG CGGATGGGAA CGTGAAGAAA TTCCTTGACG TGCTGGACGA TTTCCAAGGC
CAGTCGATGA AGCCGCAGCA AATGCAGACC ATGCGCCGCA TGCTGCAAGA CGCGGCAGGC
AGCGCGGACC CGGCAGACCG CCGCATCGGG GCCATCCTGC TTGAAAAGTT CGATGACTGG
CGCGGGCAAC ATGTGCCCGA ATACAAGCAG GCGGACGCTC TCTATGGGCG GATGAAGCGC
GCGAAGGACG TGGACTATCG GGTTGAGAAG GCCGAACGGC GCGCGGCCAG CACCGGAACG
GGCGGGAACT CTGTCAACAC GGCAAGGCAA AATATTCGCC AGATTCTTGA CAATCCGAAG
GCCCAGCGAG GCTATTCCCC CGAGGAACTG GTAGAGATGG AGAGGATCGT TCGGGGAACG
CCTGTCGTCA ACGCCCTTCG CTTGGGCGGC AGACTTTCGC CAACTTCCGG CGCCCTGCCT
CTCATCGGCA ATATCATTGG TTCTGGCCTC AATCCAATGG CGGGCGCTGC GGCTATGGGT
ATGACTTATG GCATGAAAAC AGGGGCAGAG ATGCTGACAA ACAATCAGAT CAACGCCCTG
TCTGCCATGA TCCGAAACGG CGGTCAGATG CCAGCCAATG CCCTGGCAGA CATGGAGCGA
ATGGCCGCTG CACTGATGGC CGCCAGATCG GCGCAATCTG CAACGGGTCG GTAG
 
Protein sequence
MADDLLKAAL LEKAKRELAA RQAKADRPQP GSLLDFPQVE PQPNVAQDMA AAGAAGAARG 
TTGMLDLPGM IFGAGSRAGS WVAEKTGLAS PEEAQAAHQM ATGVADQSRF GSGDKYRQAA
AEATGGATEF RGETTAGKYA GTVGEFLPGS PFGGGNLLRN ALVYGVVPGL ASEGAGQLTE
GTAYEPWARA IAPMVASGVV AAATRPRGPQ APSVDDLKAQ AEGLYQTGAA RAGADPASVQ
GLASQIDNEL QALNVKTPAG RVVADGNVKK FLDVLDDFQG QSMKPQQMQT MRRMLQDAAG
SADPADRRIG AILLEKFDDW RGQHVPEYKQ ADALYGRMKR AKDVDYRVEK AERRAASTGT
GGNSVNTARQ NIRQILDNPK AQRGYSPEEL VEMERIVRGT PVVNALRLGG RLSPTSGALP
LIGNIIGSGL NPMAGAAAMG MTYGMKTGAE MLTNNQINAL SAMIRNGGQM PANALADMER
MAAALMAARS AQSATGR