Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4087 |
Symbol | |
ID | 4582638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1242832 |
End bp | 1243461 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639771396 |
Product | hypothetical protein |
Protein accession | YP_917849 |
Protein GI | 119386794 |
COG category | [R] General function prediction only |
COG ID | [COG3926] Putative secretion activating protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.114514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.565066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGCA ATTTCGACCG CTGCTTGGCC GAAACCCTCG CGCACGAGGG AGGCTGGGCT GACGACCCGC GCGATGCGGG CGGGGCGACC ATGAAGGGCA TCACCTTCGC CACCTATCGC GCCTGGAAGA AGCGACCAAT CACGAAAGCT GAACTGCGCA ACATCACCGA TGCCGAGGTA GCGGCCATCT ACCGGCAGAA CTATTGGGAC GCGGTTCGCG GCGACGATCT GCCGGCGGGG CTGGATCTTG TCGCGTTCGA CGCATCCGTG AACAGCGGCG TCTCTCGGGG GGCAAAATGG TTGCAATCGG CGCTCGGCGT TACGGCTGAC GGCATGATAG GCCCCCAGAC CATCGCCGCA GCAAAAGCAG CCCATCCCGA GGCCGTCATT GACCGGGCGA TCAGCGCGCG GCTGGCGTTC CTGCGCGTGG CGAAGAACAC CAAGACCGGG GCCGTGCTGT GGCCGACCTA CGGCAAGGGC TGGACGCGGC GCGTGGAAAG CGTGCGCGAG GAAGCAATCG CCATGTCGAA GGTGACGACG CCGAATGCCA CCAAGCCTGC GGCGCCGTCA GCGGGCATCA TCGCCGCGCT GCTGGCGCTT TTCAAGTCCC CGTTCGGAGG AAAATCATGA
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Protein sequence | MRSNFDRCLA ETLAHEGGWA DDPRDAGGAT MKGITFATYR AWKKRPITKA ELRNITDAEV AAIYRQNYWD AVRGDDLPAG LDLVAFDASV NSGVSRGAKW LQSALGVTAD GMIGPQTIAA AKAAHPEAVI DRAISARLAF LRVAKNTKTG AVLWPTYGKG WTRRVESVRE EAIAMSKVTT PNATKPAAPS AGIIAALLAL FKSPFGGKS
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