Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4077 |
Symbol | |
ID | 4582628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1232663 |
End bp | 1233289 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639771386 |
Product | 50S ribosomal protein L25/general stress protein Ctc |
Protein accession | YP_917839 |
Protein GI | 119386784 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.518227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.260504 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAG AGATCCCTGA TCTGGTGGCC GAGGCACGCG CGGGGACAGG CAAGGGGGCC GCCCGCCAAG CTCGCCGCGA AGGCAAGGTG CCCGGCATCG TTTATGGCGA CGGCAAAGAG CCGCAGCCGA TCCAAATCGA ATTCAACTCG CTGCTGACCA AGCTGCGCGC CGGCCGCTTC ATGTCCACGC TGTGGAACCT GAAGGTCGAG GGCCAGGACG ACGTGCGCGT CGTCTGCCGC GGCGTCCAGC GCGATGTGGT CAAGGACCTG CCGACGCATA TCGACTTCAT GCGCCTGCAC CGCAACACGC GGGTGAACCT GTTCATCCAC GTGAACTTCG AGAACCAGGA CGAAGCCCCC GGCCTGAAGC GCGGCGGCAC GCTGGTCGTG GTGCGCCCCG AGGTCGAGTT GGTCGTGACC GCCTCGGACA TCCCCGAGCA GATCACCGTC GACCTGACCG GCAAGCAGAT CGGCGACACC ATCCACATTA ACGACGTGGT GCTGCCGAAG GGCGTGAAGC CGACCATCGA CCGCAACTTC GTCATCGCCA ATATCGCCGC GCCTTCGGGC CTGCGTTCGG CCGATAACGA AGAGGCTGCT GCCGAAAGCG AAGCCACCGA AGCCTGA
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Protein sequence | MAKEIPDLVA EARAGTGKGA ARQARREGKV PGIVYGDGKE PQPIQIEFNS LLTKLRAGRF MSTLWNLKVE GQDDVRVVCR GVQRDVVKDL PTHIDFMRLH RNTRVNLFIH VNFENQDEAP GLKRGGTLVV VRPEVELVVT ASDIPEQITV DLTGKQIGDT IHINDVVLPK GVKPTIDRNF VIANIAAPSG LRSADNEEAA AESEATEA
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