| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4075 |
|---|
| Symbol | |
|---|
| ID | 4582626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 1230311 |
|---|
| End bp | 1231474 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639771384 |
|---|
| Product | L-lactate dehydrogenase (cytochrome) |
|---|
| Protein accession | YP_917837 |
|---|
| Protein GI | 119386782 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.72179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.076317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTCA TCACCTGCAT CGACGACCTG AAGGCGATCT ATCGCAGGCG CGTGCCGCGC
ATGTTCTACG ACTACGCCGA AAGCGGCAGC TATACCGAGG GCACCTTCCG CGAGAACTGC
ACCGATTTCC AGCGCATCAA GCTGCGCCAG CGCGTCGCGG TGGACATGAC GGGGCGCACC
ACCGAAAGCA CGATGATCGG GCAAAAGGTC GCAATGCCGG TGGCGCTGGC CCCGGTCGGC
ATGACCGGCA TGCAATGCGC CGATGGCGAG ATCAAGGCGG CGCGCGCCGC GAAGGCCTTT
GGCGTGCCCT TCACCCTTTC GACCATGTCG ATCTGCTCGA TCGAGGACGT GGCCGAGGCG
GTCCAGGCGC CCTTCTGGTT CCAGCTCTAC GTCATGCGCG ACCAGGAATT CCTGGAGGCG
ATCATCGAGC GGGCCAGGCG CGCCAATTGC TCGGCGCTGG TGCTGACGCT GGACCTGCAG
ATCCTGGGCC AGCGCCACAA GGATCTGAAG AACGGGCTGT CGGCGCCGCC GCGGCTGACC
CTGCCGGTGC TGCTGGACCT GGCGACGAAA TGGCGCTGGG GCATCGAGAT GCTGCGCACG
AAGCGCCGCT TCTTCGGCAA TATCGTCGGC CATGCCAAGG GGGTGGGCGA CCCCTCGTCG
CTGATCGCCT GGACGGCCGA GCAGTTCGAC CCGCAGCTCG ACTGGGGCAA GATCGCCCGC
ATCCGCGACC TCTGGGGCGG CAAGCTGATC CTCAAGGGCA TCAACGATCC CGAGGATGCC
CGCATGGCCG CGGATTTCGG TGCCGATGCG ATCATCGTCA GCAACCATGG CGGCCGGCAA
CTGGACGGCG CGGTCAGTTC GATCCGCATG CTGCCCGAGA TCGTCAAGGC GGTGGGCGAC
CGGGTCGAGA TCCATCTCGA CAGCGGCATC CGCTCGGGCC AGGACGTCTT GAAGGCGCTG
GCCATGGGCG CCCATGCCAC CCATATCGGC CGAGCCTTCA TCTATGGGCT GGGCGCCATG
GGCGAGGCCG GCGTGACTCG CGCGCTGGAG GTGATCCAGA AGGAGCTGGA CATCACCATG
GCGCTGTGCG GCGAGCGCGA CGTGAAGGCC CTGGGGCGGC ACAACCTGCT GATCCCGCCG
GATTTCCTGC AAGCCTGGGC CTGA
|
|---|
| Protein sequence | MPVITCIDDL KAIYRRRVPR MFYDYAESGS YTEGTFRENC TDFQRIKLRQ RVAVDMTGRT
TESTMIGQKV AMPVALAPVG MTGMQCADGE IKAARAAKAF GVPFTLSTMS ICSIEDVAEA
VQAPFWFQLY VMRDQEFLEA IIERARRANC SALVLTLDLQ ILGQRHKDLK NGLSAPPRLT
LPVLLDLATK WRWGIEMLRT KRRFFGNIVG HAKGVGDPSS LIAWTAEQFD PQLDWGKIAR
IRDLWGGKLI LKGINDPEDA RMAADFGADA IIVSNHGGRQ LDGAVSSIRM LPEIVKAVGD
RVEIHLDSGI RSGQDVLKAL AMGAHATHIG RAFIYGLGAM GEAGVTRALE VIQKELDITM
ALCGERDVKA LGRHNLLIPP DFLQAWA
|
|---|
| |