Gene Pden_4069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4069 
Symbol 
ID4582620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1222509 
End bp1222934 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content70% 
IMG OID639771378 
Producthypothetical protein 
Protein accessionYP_917831 
Protein GI119386776 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.491688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.600925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CCCGCTTCAC CATCCAGACC CGCGGCCCGG CCTGCCACGA CTTCACCGAT 
CAGGTCGTCG CCTGGCTGCG CGGCATCGGT GCCGTGGATG GGGTGGTGGC GCTGTTCGTG
CGCCACACCT CCTGCTCGCT GCTGGTGCAG GAGAATGCCG ATCCCGACGT GCAGCGCGAC
CTGCTGGCCT GGCTCGACCG TATCGCGCCG CCGGCCGATC ATCCGTCGAT GGGCTACCTG
ACGCATCGTG CCGAGGGGCC GGACGACATG CCCGCCCATC TCAAGGCCGC GATCCTGCCG
GTCAGCCTGC AAATCCCGGT CGCGCGCGGC CGGATGGAAC TGGGCACCTG GCAGGGCATC
TATCTGGTCG AGCACCGCAC CCACCCGCAT CGGCGCGAGG TGGCGGCGCA TTTCCAGGCG
GCGTGA
 
Protein sequence
MSATRFTIQT RGPACHDFTD QVVAWLRGIG AVDGVVALFV RHTSCSLLVQ ENADPDVQRD 
LLAWLDRIAP PADHPSMGYL THRAEGPDDM PAHLKAAILP VSLQIPVARG RMELGTWQGI
YLVEHRTHPH RREVAAHFQA A