Gene Pden_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4060 
Symboleno 
ID4582611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1213306 
End bp1214583 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content67% 
IMG OID639771369 
Productphosphopyruvate hydratase 
Protein accessionYP_917822 
Protein GI119386767 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.657708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCA TCATCGACAT ATTCGCGCGC GAGATACTGG ACAGCCGGGG CAACCCGACG 
GTCGAGGTCG ATGTGACGCT TGAGGACGGC ACCATGGGCC GGGCGGCGGT GCCCTCGGGG
GCGTCCACCG GGGCGCATGA GGCGGTCGAG AAGCGCGACG GCGACAAGGC CCGCTATCTG
GGCAAGGGTG TGCTGGAGGC CGTCGCCGCC GTCAACGGCG AGATCGCCGA GAACCTGATC
GGCGAGGACG CGACCGAGCA GGTCGCCATC GACCGCATGA TGATCGAACT GGACGGCACC
CCGAACAAGG GCCGGCTGGG CGCCAACGCC ATCCTGGGCG TGTCGCTGGC GGTGGCCAAG
GCCGCGGCCG AGGCCTGCTC GCAGCCGCTC TACCGCTATG TCGGCGGCGC GGGCGCCCGC
GTGCTGCCGG TGCCGATGAT GAACATCATC AACGGCGGCG AACATGCCGA CAACCCGATC
GACATCCAGG AATTCATGAT CATGCCGGTG GCGGCGGAGA ACATCCGCGA AGCCGTGCGC
ATGGGCTCGG AAGTGTTCCA CACGCTGAAG AAGGAGCTGT CCTCGGCGGG TCTGGCGACG
GGCGTCGGCG ACGAGGGCGG CTTCGCCCCG AACCTCAGCA GCACCCGCGA TGCGCTGGAC
TTCATCCTCA AGGCCATCGA GAAGGCCGGC TACCAGCCCG GCGACGACAT CATGCTGGCG
CTGGACTGCG CCTCGACCGA ATATTTCAAG GGCGGCAAAT ACGAGATGGC CGGCGAGGGC
AAGTCGCTGA GCCCGGCCGA GAACGTCGCC TACCTGGAAG CACTGTGCAA CGACTACCCG
ATCCTGTCGA TCGAGGACGG CTGCGCCGAG GACGACTGGG ACGGCTGGAA ACTGCTGACC
GACACGCTGG GCGGCCGCGT ACAACTGGTC GGCGACGACC TGTTCGTGAC CAACCCGGCA
CGTCTGGCCG AGGGCATCGC CAAGGGCTGC GGCAACTCGC TCCTGGTCAA GGTGAACCAG
ATCGGCACCC TGACCGAGAC GCTGGACGCG GTGCGCATGG CCGACCGCGC ACGCTATACC
TCGGTGATGT CGCACCGCTC GGGCGAGACC GAGGACGCCA CCATCGCCGA CCTGGCCGTG
GCGACCAATT GCGGCCAGAT CAAGACCGGC AGCCTCGCGC GCTCGGACCG GCTGGCGAAA
TACAACCAGC TCATCCGCAT CGAGGAAATG CTCGGCGCCA CCGCCGAATA TGCCGGGAAA
TCCATCCTGC GCGGCTGA
 
Protein sequence
MTAIIDIFAR EILDSRGNPT VEVDVTLEDG TMGRAAVPSG ASTGAHEAVE KRDGDKARYL 
GKGVLEAVAA VNGEIAENLI GEDATEQVAI DRMMIELDGT PNKGRLGANA ILGVSLAVAK
AAAEACSQPL YRYVGGAGAR VLPVPMMNII NGGEHADNPI DIQEFMIMPV AAENIREAVR
MGSEVFHTLK KELSSAGLAT GVGDEGGFAP NLSSTRDALD FILKAIEKAG YQPGDDIMLA
LDCASTEYFK GGKYEMAGEG KSLSPAENVA YLEALCNDYP ILSIEDGCAE DDWDGWKLLT
DTLGGRVQLV GDDLFVTNPA RLAEGIAKGC GNSLLVKVNQ IGTLTETLDA VRMADRARYT
SVMSHRSGET EDATIADLAV ATNCGQIKTG SLARSDRLAK YNQLIRIEEM LGATAEYAGK
SILRG