Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4059 |
Symbol | |
ID | 4582610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1212457 |
End bp | 1213239 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639771368 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_917821 |
Protein GI | 119386766 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.67832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAAA GCCCCGACCA CCTGAGACTG GCCAGCTATA ACCTGCACAA GTGCCGCGGC ATGACCGGCC CGCACGCACC CGAGCGCAAC CTGCGCGTCA TCGCCGAACT GGGTGCCGAC GTGATCGCCC TGCAAGAGGT CGATTTCCGC TTCGGCGCCC GGCCCGAGGC GTTGCCGCGC GCGCTGATCG AAAAGACCAC CGGCATGGTC CCCGCCCCCT TCCTGGGCAC CGGCGAGAAT TCGCTGGGCT GGCACGGCCA GACCATCCTG CTGCGCCCCG AACTGCGCGG CAAGGCCGAG ATCCGCCGCC TGCCGCTGCC GGGGATCGAG CCGCGCGGCG CGCTGGTGCT GCGCCTGCCC GGCATCACGG TGGTGGCGGT GCATCTGGGG CTGATGCGCT CGTCCCGCCG GGCACAACTA TCGCGCATCA TCGCCCAGGC GCGGCGCATC GGCCATGACC GCATGGCGCT GACCGGCGAT TTCAACGAAT GGCACGATTC CCGCGGGCTT GAGGCGCTGG AGGCGCTGCG CGTCGTCACC CCCGGCCCCA GTTGGCCCGC ACCCTTCCCG CGCCTGCGCT ATGACCGCTT CGCCGTCTCG CGCAGCATCG AGGTGCTGGA TTGCGGCGTC CTGGACAACG AGATGGCGCG GGCGGCCTCG GACCACCTGC CGGTCTGGGC CGATCTCGCG GTCGATGCGC ATGAAGAGGT GCCGCGCGGC TACCACCCGG CGCGCATCAC CTCGCGCATT CCCGGCGAGG ACGGGGTGGC CGGGGCAGAA TGA
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Protein sequence | MPKSPDHLRL ASYNLHKCRG MTGPHAPERN LRVIAELGAD VIALQEVDFR FGARPEALPR ALIEKTTGMV PAPFLGTGEN SLGWHGQTIL LRPELRGKAE IRRLPLPGIE PRGALVLRLP GITVVAVHLG LMRSSRRAQL SRIIAQARRI GHDRMALTGD FNEWHDSRGL EALEALRVVT PGPSWPAPFP RLRYDRFAVS RSIEVLDCGV LDNEMARAAS DHLPVWADLA VDAHEEVPRG YHPARITSRI PGEDGVAGAE
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