Gene Pden_4059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4059 
Symbol 
ID4582610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1212457 
End bp1213239 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content71% 
IMG OID639771368 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_917821 
Protein GI119386766 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.67832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAA GCCCCGACCA CCTGAGACTG GCCAGCTATA ACCTGCACAA GTGCCGCGGC 
ATGACCGGCC CGCACGCACC CGAGCGCAAC CTGCGCGTCA TCGCCGAACT GGGTGCCGAC
GTGATCGCCC TGCAAGAGGT CGATTTCCGC TTCGGCGCCC GGCCCGAGGC GTTGCCGCGC
GCGCTGATCG AAAAGACCAC CGGCATGGTC CCCGCCCCCT TCCTGGGCAC CGGCGAGAAT
TCGCTGGGCT GGCACGGCCA GACCATCCTG CTGCGCCCCG AACTGCGCGG CAAGGCCGAG
ATCCGCCGCC TGCCGCTGCC GGGGATCGAG CCGCGCGGCG CGCTGGTGCT GCGCCTGCCC
GGCATCACGG TGGTGGCGGT GCATCTGGGG CTGATGCGCT CGTCCCGCCG GGCACAACTA
TCGCGCATCA TCGCCCAGGC GCGGCGCATC GGCCATGACC GCATGGCGCT GACCGGCGAT
TTCAACGAAT GGCACGATTC CCGCGGGCTT GAGGCGCTGG AGGCGCTGCG CGTCGTCACC
CCCGGCCCCA GTTGGCCCGC ACCCTTCCCG CGCCTGCGCT ATGACCGCTT CGCCGTCTCG
CGCAGCATCG AGGTGCTGGA TTGCGGCGTC CTGGACAACG AGATGGCGCG GGCGGCCTCG
GACCACCTGC CGGTCTGGGC CGATCTCGCG GTCGATGCGC ATGAAGAGGT GCCGCGCGGC
TACCACCCGG CGCGCATCAC CTCGCGCATT CCCGGCGAGG ACGGGGTGGC CGGGGCAGAA
TGA
 
Protein sequence
MPKSPDHLRL ASYNLHKCRG MTGPHAPERN LRVIAELGAD VIALQEVDFR FGARPEALPR 
ALIEKTTGMV PAPFLGTGEN SLGWHGQTIL LRPELRGKAE IRRLPLPGIE PRGALVLRLP
GITVVAVHLG LMRSSRRAQL SRIIAQARRI GHDRMALTGD FNEWHDSRGL EALEALRVVT
PGPSWPAPFP RLRYDRFAVS RSIEVLDCGV LDNEMARAAS DHLPVWADLA VDAHEEVPRG
YHPARITSRI PGEDGVAGAE