| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4042 |
|---|
| Symbol | |
|---|
| ID | 4582593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1191781 |
|---|
| End bp | 1193100 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639771351 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_917804 |
|---|
| Protein GI | 119386749 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4949] Uncharacterized membrane-anchored protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCCG CCCATCATGC GCCCATGAAC GACGAAGACG AACACCCCCA GCGCTACGGC
CTGGTGAACG AGCTGCACGC CCGGCCCTCG CCGCGGCTCA AGGCGCCCTG CACCGCGGTA
TTCCTGGCGA TCAAGGAACC GCGCGACGCG GCCAACCGCG ACCGGGGCAG GGATGTCGCG
CATCTGGCCG CGCTTTGCGC CCGGCACGGC GCGCCACGCC CCGACACCAG CGCCGGGCAT
TACACGGCCC AGCTTGGCCG CCACCAGCTG CGCTGGGAAA GCCATACCGA GTTCGTCACC
TATGCCGCCT TTGCGCCCGG CCTGCCGCCG CGCCCCTTCG ATCCCTCGGC CGGGGCGATC
TTTCCCGAGG ACTGGCAGCA TGACGCACCC GGCAAGCGCA TCGCGGCGGT GATGATCCAG
GTCGATTTCC TGCCCGAGAA CCCGGCCGAC ATCCTGCCGC GCCTGTCGGA CTGGTTCGCG
GCCGACAGCC TTGCCTCGGT CTGGGTGCTG GAGGAGGCGG CGGTGGTGGC CGGCGATTTC
CGCATCGATC CTGCCGGCTG GATGCGCTTT GCGCTGTTCG TCAAGCCCGA CACGCAGCCC
GGCCGGATCG GGCGCATCGT GCAGCGGCTT CTGGACCTGG AGACCTATCG CGCAATGTCC
ATGCTGGGCC TTGGCCGCGC GCGCGACCTG ACCCGGCAGC TCAATGCGCT GGATCCGCAG
CTCAGCGACA TCGTGCAGGG CATGAGCGAC GAAAGCCGTC CGGCCGAGGC GGTGCTGCAA
GACCTGCTTT CGGTCTCGAC CCGGCTGGAA AGCGCGGCGA CCCAGCATGC CTTCCGCTTT
GGCGCCAATG CGGCCTATGA GGCCATCGTC ATGGACCGCG TCGCCTCGCT GCGCGAGACG
CGCTTCCTGG GTGGCCAGAT GCTGACCGAG TTCATGGCCC GGCGCTATCT GCCGGCGATG
CGCACCGCAA AATCGGCCGA AAAGCGGCTG GCCGCCATGC TGGACCGCAG CGAACGGGCG
GGCGAACTGC TGCGCACCCG CGTCGATGTC CAGCGCAGCG CCCAGAACCA GGAGCTGATG
CAACGCATGG ACCGGCGCGC CGACCTGCAA TTGCGGCTGC AGCACACGGT CGAGGGGCTG
TCTGTGGTGG CGATCAGCTA TTACGCGGTC GGTTTGCTGG GCTATGCGCT CTACCCGCTG
GCCCATGCGC TGCATATCGA CAAGGCGGTG CTGGTCGCCG CACTGACCCC CATCGCCGTG
CTTGGCGTCT GGCTGGGCAT GCGGCGCATC CGGGCGCGGC TGCATGACGG CGGCCACTAG
|
|---|
| Protein sequence | MPPAHHAPMN DEDEHPQRYG LVNELHARPS PRLKAPCTAV FLAIKEPRDA ANRDRGRDVA
HLAALCARHG APRPDTSAGH YTAQLGRHQL RWESHTEFVT YAAFAPGLPP RPFDPSAGAI
FPEDWQHDAP GKRIAAVMIQ VDFLPENPAD ILPRLSDWFA ADSLASVWVL EEAAVVAGDF
RIDPAGWMRF ALFVKPDTQP GRIGRIVQRL LDLETYRAMS MLGLGRARDL TRQLNALDPQ
LSDIVQGMSD ESRPAEAVLQ DLLSVSTRLE SAATQHAFRF GANAAYEAIV MDRVASLRET
RFLGGQMLTE FMARRYLPAM RTAKSAEKRL AAMLDRSERA GELLRTRVDV QRSAQNQELM
QRMDRRADLQ LRLQHTVEGL SVVAISYYAV GLLGYALYPL AHALHIDKAV LVAALTPIAV
LGVWLGMRRI RARLHDGGH
|
|---|
| |