Gene Pden_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4016 
Symbol 
ID4582567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1162815 
End bp1163705 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content66% 
IMG OID639771325 
Producthypothetical protein 
Protein accessionYP_917778 
Protein GI119386723 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCAC GCTCGCAGCC CAACCTGCGC GATATCCTGC TTACCCTCAA CGGTTCGATC 
ATTCCGGTGA TCCTGGGCCG CCTGACGGTG ATCGGGGTGG TCTGCATCGC GGCCATCCTG
GCGGCGCGGA TGCATCCCGG CATCTTTGCC CGGATCAGCG CCATCCCCTT TACCCTGATC
GGCATCGCGC TTTCGGTGTT CATGAGCTTT CGCAACAGCA CCTGCTATGC GCGCTGGTGG
GAGGGGCGCC AGCTTTGGGG GCAGGTGATC GTCGCTTGCC GTGGCATCGC GCGGGCCAGC
GCCGGACTGG AATCCCAGAC CCGCATGCGG CTGTTGCGGT CGCTTTGCGC CTTTGCGGGC
GGGCTCTCCG CACGGTTGCG CCATCAGGAC GAGATCGCTG CGATCGCCCG CTGGATACCG
GCCGAGGATA TTCGCGGATG CCGCAATCCC TCGGATCGCG TCTTGCGGAT TGCCGGCGAA
GAGCTCATCG CGGCGGTCGA GCACGGTCGG CTGGGCGACA TCCGCTGGTC GGTGCTGGAG
GGATATCTGG ACCAGCTCTC GGCGGCGCAG GCGGCCTGCG AGCGGATCGC CTCGACCCCG
GTGCCCTTCG CCTATTCCCT GCTTTTGCAC CGCACCGCGC TGGTTTTCTG CCTGCTGCTG
CCCTTTGCAT TGGCGGGAGC ACTGGGCTGG TGGACGCTCC TCCCCGTGCT TCTGGTGGCC
TATACCTTCT TTGGCCTCGA TGCCCTGAGC CATCAGCTGG AGGATCCCTT CGGCGGTTCG
CCGAACGCCC TCCCGCTGGA TGTCATGCGC CAGAACATCG AACGCGAGAT GATGGATGCA
TTATCCGGCC CAAGGCCGCC CACCGTGCCG GAAGCCGTCG ACGGCCGGTA G
 
Protein sequence
MTPRSQPNLR DILLTLNGSI IPVILGRLTV IGVVCIAAIL AARMHPGIFA RISAIPFTLI 
GIALSVFMSF RNSTCYARWW EGRQLWGQVI VACRGIARAS AGLESQTRMR LLRSLCAFAG
GLSARLRHQD EIAAIARWIP AEDIRGCRNP SDRVLRIAGE ELIAAVEHGR LGDIRWSVLE
GYLDQLSAAQ AACERIASTP VPFAYSLLLH RTALVFCLLL PFALAGALGW WTLLPVLLVA
YTFFGLDALS HQLEDPFGGS PNALPLDVMR QNIEREMMDA LSGPRPPTVP EAVDGR