| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4011 |
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| Symbol | |
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| ID | 4582562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1156179 |
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| End bp | 1157183 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639771320 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_917773 |
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| Protein GI | 119386718 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.897477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGCA TCGATCTGAC CGTCGTCTGG GCGCTGATCA TCGGCTTCGC GGTCTTTGCC
TATGTGGTGA TGGACGGGTT CGACCTGGGT ATCGGCATCC TGTTCCCGAC GCTGAAGGTC
GGCGAGGAAC GCGACCAGGC GATGAACTCG ATCGCACCTG TCTGGGACGG CAACGAGACA
TGGCTGGTGC TGGGCGGCGG CGGGCTGTTC GCGGCCTTTC CGCTGGCCTA TGCGATCATC
CTGCCGGCCA CCTATCCGCT GATGATCGCC ATGCTGCTGG GCCTGATCTT TCGCGGCGTC
GCCTTCGAGT TCCGCTGGCG CGACCCGCGC CACCGCGCCT TCTGGGACCT GGCCTTCACG
GGTGGTTCGG TCGTGGCGGC GCTGTCGCAG GGCATCGCGC TCGGCGCCAT CCTCCAGGGC
ATCCGGGTCG AGAACGGGGC CTATGCCGGG GGCTGGCTTG ACTGGCTCAG CCCGTTCAGC
CTGCTGACCG GGATCGCGCT GCTGACGGGC TATGCGGCGC TTGGCGCGGC CTGGCTCAAC
TGGAAGACCG AAGGCGGCGC GCAGAGCCAC GCCCGCCGCA TGGTGCATCT GCTTGCGCCC
GCCATGATCG CCATGCTGAT CGCGGTCAGC GCCGCGACGC CCTTTCTCAA CTACGACTAT
TGGCGGCGCT GGTTCGACTT TCCAGGGGTG CTGCTGACGG CGCAGGTGCC GCTTCTGGTT
GCGATCTGCG CCTTGGTGCT GTTCCGCAGC CTGATCGCCG GCGCCGAGCG GCTGCCCTTC
CTGATGCTTC TCGCCCTGTT CCTGTTGTGC TTCATCGGGC TGGGCATCAG CATCTTTCCC
TATGTCGTGC CCCGCTCGGT GACGATCTGG GATGCGGCGG CACCGCTGCG CAGCCAGTCC
TTCATGCTGG CAGGCGCGAT GTTCATCATC CCGATCATCC TGATCTACAC GGGATGGGCC
TATTGGGTGT TCCGCGGCAA GGTCGGAACA CACGGCTATC ATTGA
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| Protein sequence | MESIDLTVVW ALIIGFAVFA YVVMDGFDLG IGILFPTLKV GEERDQAMNS IAPVWDGNET
WLVLGGGGLF AAFPLAYAII LPATYPLMIA MLLGLIFRGV AFEFRWRDPR HRAFWDLAFT
GGSVVAALSQ GIALGAILQG IRVENGAYAG GWLDWLSPFS LLTGIALLTG YAALGAAWLN
WKTEGGAQSH ARRMVHLLAP AMIAMLIAVS AATPFLNYDY WRRWFDFPGV LLTAQVPLLV
AICALVLFRS LIAGAERLPF LMLLALFLLC FIGLGISIFP YVVPRSVTIW DAAAPLRSQS
FMLAGAMFII PIILIYTGWA YWVFRGKVGT HGYH
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