| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4007 |
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| Symbol | |
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| ID | 4582558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1148956 |
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| End bp | 1150926 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771316 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_917769 |
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| Protein GI | 119386714 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.755968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.278919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAG CGGCGCCCCT GCTTCGCCGC TCGGTGCGCC ACAAGCTGCT GGCAATCGCC
CTGATCCCCG TCCTGGTGAT CCTGCCCCTG TTCCTTGGCG TCACCCTGTA TCAATGGTCG
CACAAGCTGG ACCGGCTGCT GCTGGTCAAG GTCAACAGCG ACCTGACCGT GGCCCGGCAA
TATCTGGGCC GCATCCTCGA TACGACCGGC GAGCGGATAG AGATGCTGGC CCGCTCCGAG
GAATTCGCCC GCACGACCGA TCCGGGCGCG CTGCTGGAAA CATATCGCGA CAGGCTGGGG
CTGGACTACC TGTATCTGGC CGCCCCGGAT GGCCGGATCG TGGCATCGAG CCCGGAAGAT
GCCCATCCCG TCCCGCCCCG GAACCCGGCG CCCGCACAAG GCGCATGGAA CACGCTGGAG
GTTTTCGACC GCGACCAGCT TTACGCCATC GCTCCGGCCC TTGCCGTCCG CGCCGAAATG
GAGCGGCCGG GCAGCGCGGC GGCAAGCCGG TCCTCGATCG AGACCCGGGG CATCGTGGCG
CAGTCGATCG TCGCGGCGAA ACTGCCCGGC GAGGATGCCG CCGCATCCAT GGTCGGAGGC
ATCCTGCTGA ACCGCAACCT GTCGGTCGTC GACAGCATCA ACGCCCTGAT CTATCGCTCC
GACAGCCTGC CCGAAGGCAG TCACGGAACC ACCTCGCTGT TTCTCGACGA CCTTCGCATC
GCCACCAACG TGACCGTGCC CGGCGGTGCC CGCGCCCTGG GCACCCGTGC CTCGACCGCG
GTGCGCGACC GCGTGATCGG ACAGGGCCAG GTCTGGCTGG ACCGCGCGCA GGTTCTGGAC
GACTGGTATG TCTCGGCCTA TGCCCCGCTT CGCGACGGCG CCGGCAGGCC GGTCGGGATG
ATTTACGTCG GCATCCTCGA ACATCCGTTC GCCGCCGCGA AACGCCGCAC GGTGGGATGG
GTGTTGATCG GCTTCCTGTC GGTGGCGCTG GTGACGGTGC CGTTGTTCCT GCGTTGGGCG
CGCAGCATCT TTCGTCCGCT TGAGCGTATC GGGGCGACCT TCGAAAAGGT CGGCGCGGGC
GATCTTGCGG CACGCACCGG CATCAGCCGC GGCGACGACG AAATCGCCGA ACTTGCCCTG
GCCCTTGATG GCGTGCTGGC GCAGCTCCAG GACCACGACC GGCAGATGCG GGCCTGGAAT
GACGAGCTGA ACCAGAAGGT GGAAGACCGC ACCGCGGCGC TGCGGCGGGC CGCGCAAGAG
CTTGAGGCCG CGACCTATCA GCTGGTCCAG TCCGAAAAAC TGGCCGCTCT TGGCGAAATA
TCGGCCGGCA TCGCGCATGA GATCAACAAC CCGCTGGCCG TGATCCAGGG CAATCTGGAC
GTGCTGCGCG AAGTGCTGGG CGATGCTGCC ACGCCCGCCG ATACCGAATT GCGGCTGATC
GACGATCAGA TCCGGCGCAT CTCGCTGATC GTGACGCAAC TGCTGGACTT CGCGCGGGCG
GACCAGGCGG GCGAGGACCA TCCCGCCACC GATCTTGCGC AGGCGGTGGC CGAATGCGTG
CCGCTGGTGG GGCATATGCT GGCGCGCTCC TCGGTCTCGC TGCGCCAGGA CATCCGCTCG
GATCGTCCGG TCCGCATCAG TCGCATCGCC GTGCAGCAGG TGCTGGTCAA CCTGATCGTC
AACGCGGTCC ACGCCATGCC GAAAGGCGGC GAGATCCGCA TTGCCGGGCA GGACGAGGAT
CGCGCCGGCG CGGCAGGCGT GCTGCTGGAG GTCGCCGACG ATGGCGAAGG GATACCCGCC
GCGATCCTGA AGAACCTGTT CGAACCCTTC GTCACCAGCC GCGCCGGCAG CGGCGGCACC
GGCCTGGGCC TGTCGATCTG CCGCAGGCTG ATCGAGCGGC AAGGCGGCAC CATCGCCGTC
AGCAGCGACA ACGGGGGTAG CACCTTCCGC ATCTGGCTTC CGGCCGCATG A
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| Protein sequence | MPEAAPLLRR SVRHKLLAIA LIPVLVILPL FLGVTLYQWS HKLDRLLLVK VNSDLTVARQ
YLGRILDTTG ERIEMLARSE EFARTTDPGA LLETYRDRLG LDYLYLAAPD GRIVASSPED
AHPVPPRNPA PAQGAWNTLE VFDRDQLYAI APALAVRAEM ERPGSAAASR SSIETRGIVA
QSIVAAKLPG EDAAASMVGG ILLNRNLSVV DSINALIYRS DSLPEGSHGT TSLFLDDLRI
ATNVTVPGGA RALGTRASTA VRDRVIGQGQ VWLDRAQVLD DWYVSAYAPL RDGAGRPVGM
IYVGILEHPF AAAKRRTVGW VLIGFLSVAL VTVPLFLRWA RSIFRPLERI GATFEKVGAG
DLAARTGISR GDDEIAELAL ALDGVLAQLQ DHDRQMRAWN DELNQKVEDR TAALRRAAQE
LEAATYQLVQ SEKLAALGEI SAGIAHEINN PLAVIQGNLD VLREVLGDAA TPADTELRLI
DDQIRRISLI VTQLLDFARA DQAGEDHPAT DLAQAVAECV PLVGHMLARS SVSLRQDIRS
DRPVRISRIA VQQVLVNLIV NAVHAMPKGG EIRIAGQDED RAGAAGVLLE VADDGEGIPA
AILKNLFEPF VTSRAGSGGT GLGLSICRRL IERQGGTIAV SSDNGGSTFR IWLPAA
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