| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3999 |
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| Symbol | |
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| ID | 4582550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1138068 |
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| End bp | 1140416 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771308 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_917761 |
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| Protein GI | 119386706 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.54012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.826111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACA GGAAACTCGG CAAGGGCGCG CTGGCGCTGA TCTCGGCGCT GGCAGTGGCC
GCGCCGGTCG CGATGGTGGC GACCCCCGCC TCGGCCTATG TCTTCAGCAA CGTGCGGATC
GAGGGCAACC AGCGCATCGA ACCCGCGACG ATCCTGTCCT ATCTGGATCT GCCGCGCGGC
CAGGACGTCT CGGCCGGGGC GCTGAACGAC GCCATGCAGC GGCTTCAGAA CTCGGGCCTG
TTCGAGACGG TCGAACTGGT GCCCTCGGGC GGGACGCTGG TGGTTCGGGT GGCGGAATAT
CCCACCATCA ACACCGTCGC CTTCGAGGGC AACAGGCGGC TCAAGAACGA GAACCTGGCC
GAGATCGTCA AGTCGCAGTC GCGCCGGGTC TATTCCCCCG CCCAGGCCGA GGCCGATGCC
GCTGCGATCA GCCAGGTCTA TGCCTCGCAG GGGCGCCTGG CCGCCCGCGT CGATCCGCGC
ATCATCCGCC GCGGCAGCAA CCAGGTCGAT CTGGTCTTCG AGATCCGCGA AGGCGACGTG
ACCGAGATCG AGCGCATCGG TTTCGTCGGC AACCGCGCCT TTTCCGACCG CCGGTTGCGC
AACGTGCTGC AAACCAAGCA GGCCGGCATC CTGCGCACCT TCATCCGCCG CGACACCTTC
GCCCCCGAGC GGGTGCCGCT GGACGAGAAG CTGCTGACCG ATTTCTACCG CTCGCGCGGC
TATGCCGATT TCCGCGTGCA GGCGGTGGCG CCGGAACTGG CTCGGGAACG CGACGCCTTC
TACATCACCT TCCAGATCCA TGAAGGCCCG CGCTATACCT TCGGTACCAT CAACACCGTC
AGCGAAATCC CGGGCGTCGA TGCGACGGAA TTCGCCGCCC AGAACCGGGT CAAGCGCGGC
GCGGTCTACA ACCCGACCGA CATCGACACC ACCATCCGCC GGATGGAGGC GCTGGCGCTG
CGCAAGGGGC TGAACTTCGT CAATATCGAG CCGCGCGTCA CCCGCAACGA GCGCAGCCAG
ACCCTGGACC TCACCTTTGC CCTGACGCGC GGGCCACGCG TCTTCGTCGA GCGCATCGAC
ATCGAGGGCA ACACCACCAC GCTGGACGAG GTGATCCGCC GCCAGTTCGC CACGGTCGAG
GGCGACCCCT TCAACCCGCG CGAGATCCGC AATTCGGCCG AACGGCTGCG CGCGCTTGGC
TTTTTCTCGG ATGTGCAGGC GGAAAGCCGT CCGGGCTCGT CGCCCGAGCA GGTCATCGTC
GACGTGAACG TCGAGGAACA GCCGACCGGC AGCCTGAACT TCGGCGTCAG CTACGGCGCC
GCGACCGGCG TCGGCTTCAA CATCTCGCTG TCGGAAAAGA ACTTCCTGGG CCGCGGGCAG
CAGGTGGACC TGGCCTTTTC GACCGGCACG GATACGCAAA GCTCGGGCCT GACCTTCGTC
GAGCCCTATT TCCTGGGACG CAACCTGCGC GCCCGGGCCC AGGCCTGGTA CAACACCACC
GACCGGCTGA ATTCGGACTA CAACACCCGC ACCGTCGGCT TCCTGACCGG GATCGAGTTC
CCGGTCTCGG AAAACGGCCG AGTGGAGCTG CGCTACAAGC TCAGCAAGGA CACGCTGTTC
GACGTCGAAG AGATCCACAT GGATTCGGAA AGCAGCCGGC TGGTCGGCTC GTCGCCGATC
CTCTTCGACG AGCAGGGCGG CTTCTTCACC TCGGCAGTCG GCTATACCTA CAGCTATGAC
AGCCGCATCG CCGGGCTGGA TCCGGTGACC AGCTACCGGC TGCGCGCCGG CCAGGATTTC
GCCGGGCTGG GCGGTGACGT GAAGTCTGTC ACCAGCACGC TTTACGCCGG CGTCGAAAGC
CGCGCATGGC GCGAAAACGT GACCATGCTG GCCGAGCTGG AGTTTGGCGC GGTGCATATG
CTGGACGACC AGAACAGCCG CTTCCTGAAC CGCTTTACCG GCAACGGCAA GATTCGCGGC
TTTGAGCCGA ACGGGCTGGG ACCGCGCGAC CTGAACGCGC CGAACCAGGA CGCGCTTGGC
GGCAACTACT TCTGGGCGCT GCGCACCGAG TTGCAGTTCC CGCTGGGCCT GCCCGAGGAA
TATGGCATCA CCGGCGGGCT TTTCGCCGAT GCCGGTTCTG TCTGGGGGCT GGACAACACC
ACCGGCGCGA CGCCCGGCGA CTATCCGCAA GAGGTCGACG ACGGCATGAA GGTCCGTGCC
GCGGTCGGCG CCTCGATCTT CTGGACCACG CCGATCGGCC CGTTGCGCTT CAACTTCGCC
AAGGCCCTCA AGAAAGAGGA CTATGACGAG GAGCAGACCT TCGACCTGAC CATCTCGACC
CGGTTCTGA
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| Protein sequence | MTDRKLGKGA LALISALAVA APVAMVATPA SAYVFSNVRI EGNQRIEPAT ILSYLDLPRG
QDVSAGALND AMQRLQNSGL FETVELVPSG GTLVVRVAEY PTINTVAFEG NRRLKNENLA
EIVKSQSRRV YSPAQAEADA AAISQVYASQ GRLAARVDPR IIRRGSNQVD LVFEIREGDV
TEIERIGFVG NRAFSDRRLR NVLQTKQAGI LRTFIRRDTF APERVPLDEK LLTDFYRSRG
YADFRVQAVA PELARERDAF YITFQIHEGP RYTFGTINTV SEIPGVDATE FAAQNRVKRG
AVYNPTDIDT TIRRMEALAL RKGLNFVNIE PRVTRNERSQ TLDLTFALTR GPRVFVERID
IEGNTTTLDE VIRRQFATVE GDPFNPREIR NSAERLRALG FFSDVQAESR PGSSPEQVIV
DVNVEEQPTG SLNFGVSYGA ATGVGFNISL SEKNFLGRGQ QVDLAFSTGT DTQSSGLTFV
EPYFLGRNLR ARAQAWYNTT DRLNSDYNTR TVGFLTGIEF PVSENGRVEL RYKLSKDTLF
DVEEIHMDSE SSRLVGSSPI LFDEQGGFFT SAVGYTYSYD SRIAGLDPVT SYRLRAGQDF
AGLGGDVKSV TSTLYAGVES RAWRENVTML AELEFGAVHM LDDQNSRFLN RFTGNGKIRG
FEPNGLGPRD LNAPNQDALG GNYFWALRTE LQFPLGLPEE YGITGGLFAD AGSVWGLDNT
TGATPGDYPQ EVDDGMKVRA AVGASIFWTT PIGPLRFNFA KALKKEDYDE EQTFDLTIST
RF
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