| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3997 |
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| Symbol | |
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| ID | 4582548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1135470 |
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| End bp | 1136642 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639771306 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_917759 |
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| Protein GI | 119386704 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.409634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCA TATCCGTGCT GGGCGCGACC GGGTCGGTCG GCGAAAGCGC ATTCGATCTG
TTGATGGGGG CCGGCGGCCC CGAGCGCTTC CGCACCGTCG CCCTGACCGG CGGCGCCAAT
GTCGCGCGGC TGGCCCAGAT GGCCCGCGCG CTGCGGGCCG AACTCGCCGT CACCGCATGG
CCGGAGCGCC TGGCCGATCT GCGCGCGGCA CTTGCCGGCA GCGGGATCGA GGCCGCGGCG
GGACCGCAGG CCGTGGCCGA GGCCGCCGCC CGCCCGGCCG ACTGGACGCT GTCCGCCATC
GTCGGCGCCG CCGGCCTGCC GCCGGGGCTT GAGGTGCTGA ACCGAGGCGG CACCCTGGCG
CTGGCGAACA AGGAAACCCT GGTGGCCGCC GGACCGCTGG TCATGGCCCG CGCCCGGGAG
ACCGGCGCAC GCATCCTGCC GGTTGATTCC GAGCATTCCG CGATCTTTCA GGCACTTCAC
GGCGAAAACC TCGATTCCGT CGAGCATGTG ACCATCACCG CCTCGGGCGG CGCATTCCGC
GACTGGCCGC TGGAGCGGCT GGCACGCGCG ACGGTGGCCG AGGCCAGCCG GCATCCGAAC
TGGGACATGG GCCAGCGCAT CACCATCGAC AGCGCCAGCA TGTTCAACAA GGCGCTGGAA
GTCATCGAGG CGCATGAATT CTTCGGCCTG GGCGTCGACC GCCTGCGGGT GCTGGTGCAT
CCGCAATCGA TCATCCATGC CATGGTCACG CATCGCGACG GCGGCAGCAT CGCGCATCTG
GGGGCGCCGG ACATGCGCCA TGCCATCGGC TATGCGCTGA ACTGGCCCGC GCGCGCCGCC
CTGCCGGTGC CGGCGCTGGA CCTGGCGGCG CTTGGCAGCC TGACCTTTGC CCAGCCGGAC
GAGGTGCGCT GGCCTGCCCT GCGGCTGGCG CGCGAGGCGA TCGGGGCCGG CGGTGCCGCG
GGTGCGGTGC TGAACGCCGC CAAGGAGCAG GCGCTGGACG ACTTCATCGC CGGGCGCATC
CGCTTTACCG ACATGGCGCC CGCGGTCGAG CACGCGCTGG CGCTGGCCGC GCGCGAGGCC
GGCTTTGCGC AAAGTCCGCG CGACCTTGGC GAAGTGCTGC ATTGGGACGA TTTCGCGCGG
CGGGCGGCAG CGCAATGGCA GGGGGCGGCA TGA
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| Protein sequence | MRSISVLGAT GSVGESAFDL LMGAGGPERF RTVALTGGAN VARLAQMARA LRAELAVTAW
PERLADLRAA LAGSGIEAAA GPQAVAEAAA RPADWTLSAI VGAAGLPPGL EVLNRGGTLA
LANKETLVAA GPLVMARARE TGARILPVDS EHSAIFQALH GENLDSVEHV TITASGGAFR
DWPLERLARA TVAEASRHPN WDMGQRITID SASMFNKALE VIEAHEFFGL GVDRLRVLVH
PQSIIHAMVT HRDGGSIAHL GAPDMRHAIG YALNWPARAA LPVPALDLAA LGSLTFAQPD
EVRWPALRLA REAIGAGGAA GAVLNAAKEQ ALDDFIAGRI RFTDMAPAVE HALALAAREA
GFAQSPRDLG EVLHWDDFAR RAAAQWQGAA
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