| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3990 |
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| Symbol | |
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| ID | 4582541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1129363 |
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| End bp | 1130133 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639771299 |
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| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
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| Protein accession | YP_917752 |
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| Protein GI | 119386697 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.851203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.390438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG GCAAGAAGCC GGGCTCCGGG CGCAAGAGCT CGGGCCGCGG CCAGCGCGAC
CTGCGGGTGC GGGTCAAATC GGCCAAGGGA CGCAAGCTTT CCAGCACGCT CTGGCTGGAG
CGGCAGTTGA ACGACCCCTA TGTCGCGCGG GCGAAGCGCG AGGGCTATCG CGGCCGCGCC
GCCTACAAGA TCCTGGAACT GGACGACAAG TATCGCTTCC TGGTGCCGGG GGCGCGGGTG
GTCGATCTGG GCTGCGCGCC GGGCGGCTGG TGCCAGGTGG CGGTCGCGCG GGTGAACGCC
CTGGGCGACA AGTCCGGCAA GAAGGTCGGC CGCGTGCTGG GCGTGGACCT GCAAGAGGTC
GATCCGATCC CGGGGGCCGA GATCCATCAG CTGGACTTCC TGTCGGAGGG TGCGGACGAA
CAGGTCAAGG CATGGCTGGG CGGCCGGGCC GATGTGGTGA TGTCGGACAT GGCCGCGGCC
TCGTCCGGGC ACAAGGGCAC CGACCACCTG CGCATCGTCG CGCTGGTCGA GGCGGCGGCG
CAACTGGCCT TCGACGTGCT GGAGCCGGGC GGCACCTTCG TCGCCAAGGT TCTGGCCGGC
GGGGCCGAGA ACGAGATGCA GGCCATGCTC AAGCGCAATT TCCGCAAGGT GGCGAATGTG
AAGCCCCCGG CAAGCCGCTC CGACTCTTCC GAGAAATTCG TGGTGGCCCA AGGGTTCCGC
GGCCGTGGCG ACGCGGAGGA TGTCGAAAAC GGCGAGGACG ACGGGGCATG A
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| Protein sequence | MSEGKKPGSG RKSSGRGQRD LRVRVKSAKG RKLSSTLWLE RQLNDPYVAR AKREGYRGRA
AYKILELDDK YRFLVPGARV VDLGCAPGGW CQVAVARVNA LGDKSGKKVG RVLGVDLQEV
DPIPGAEIHQ LDFLSEGADE QVKAWLGGRA DVVMSDMAAA SSGHKGTDHL RIVALVEAAA
QLAFDVLEPG GTFVAKVLAG GAENEMQAML KRNFRKVANV KPPASRSDSS EKFVVAQGFR
GRGDAEDVEN GEDDGA
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