Gene Pden_3986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3986 
Symbol 
ID4582537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1124804 
End bp1126003 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID639771295 
Producthypothetical protein 
Protein accessionYP_917748 
Protein GI119386693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.455536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.232162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC CCTTTCGTCG CCGCATCCTT TACATTCCGG GCTATGACCC GATCCCGCCC 
CGCCGCTATC GCGAACTTTA CAGGCGCGAG GGCGCCGAAC AGGCGCGCAT CTCGGGCTAC
AGGCTGGAAT TGGGCCCGCG GCGCGACCGC AAGGGCTTCG GCTGGGGCGT GAGCGGCGAT
TTCGGCGGCC GGCGCGTCGA AGCCGAGTTC GAGGTGCTGG TCTGGGCCGA TATCGTGCAG
GGCTCGATGG GCCAGGGTAT CCTTGCGACC TATGGCCAGC TTTTCCGCAC GGCATGGGCC
TATATCGGCT CGGGCGCGCT GATGCGTCTG GCGCGGCTGC GGCGCGGGCC GGTGATCGCG
GCGCTTTATC CGGTGGCGGT GCTGCTGGCG CAGCTTCTGC TCTCGGCGCT GGCCGGGGCG
CTCATCGGCT GGGCTTTGGG GCGGCTGACC GGCCTTGGCT GGTGGCTGGG CGGGCCGGTC
ATGCTGGCGC TGACCTGGGC GGGGCTGCAT TTGTGGCGGC GCATCGACGG CAGGATCTTC
GCCTGGTATC TGATGCATGA CTATGCCTTC ACCGCCCGGG ATCTGGGCGC CTATCCCCCG
GCGCTGGAGG CGCGGCTGGC CCTTTTCGCC GACCGCATCG CAGAGGTGCT GGCGGGCGAC
TGGGACGAGG TGCTGGTGGT CGGCCACAGT TCGGGCGCCT ATCTGGGCGT CTCGGTGCTG
GCCGGGCTGA TCCGCTCGGG GCGGGTGCCG GCGCAGGGGC CGCGCCTCTC CTACCTGTCG
CTGGGCCATG TCGTGCCGAT GGCGTCCTTC CTGCCGCGCG CGAACCGCCT GCGCGCCGAC
CTGCGCGATC TCGCGGGCAG CGCGAAGCTC GACTGGATCG ACGTGACCGC GCCGGGCGAT
GCCTGCTGCT TCGGGCTTTG CGATCCGGTG GCGGTCTCGG GGGTCGAGCC GCCCGGGCGC
CGCCATCCGC TGATCCTTTC CGCCGCCTTC ACCCAAACGC TGTCGCCCGA AAAGCGGCGC
AAATTGCGCG GGCGCTGGTT TCGGCTGCAT TTCCAGTATC TCTGCGCTTT CGACCGGCCG
GGCGACTACG ACTATTTCGC CATTACCGCG GGACCGCTGA CGCTCGGCCG GCGTTTCGCC
GGGCGCTCGC ATTCGCCGGG CCGGATCGCC CGGCCCGTCA ATCGCTGGGT GGCGACATGA
 
Protein sequence
MTRPFRRRIL YIPGYDPIPP RRYRELYRRE GAEQARISGY RLELGPRRDR KGFGWGVSGD 
FGGRRVEAEF EVLVWADIVQ GSMGQGILAT YGQLFRTAWA YIGSGALMRL ARLRRGPVIA
ALYPVAVLLA QLLLSALAGA LIGWALGRLT GLGWWLGGPV MLALTWAGLH LWRRIDGRIF
AWYLMHDYAF TARDLGAYPP ALEARLALFA DRIAEVLAGD WDEVLVVGHS SGAYLGVSVL
AGLIRSGRVP AQGPRLSYLS LGHVVPMASF LPRANRLRAD LRDLAGSAKL DWIDVTAPGD
ACCFGLCDPV AVSGVEPPGR RHPLILSAAF TQTLSPEKRR KLRGRWFRLH FQYLCAFDRP
GDYDYFAITA GPLTLGRRFA GRSHSPGRIA RPVNRWVAT