| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3982 |
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| Symbol | |
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| ID | 4582533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1120068 |
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| End bp | 1121462 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639771291 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_917744 |
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| Protein GI | 119386689 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.679076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCATGG CTGGGCGCAT TCTTGTCGTT GACGGCTTGC CGACGAATCG CATCACGATG
AAGGTGCGGC TGGCTTCGGC CTGCTACGAG GTCTCGACCG CCAGTTCGGG GGCCGAGGCG
CTGCGCTTGG CGCGGCTGAT CCACCCGCAG ATCGTGCTGA TCGGTGCCAA CCTGCCCGAC
ATGGACGGCC CTGCCCTTTG CAACGCAATG CGCGCCCTGC CCTGCGCGGC CGACCTGCCG
GTGCTGGTCC AGGCCAGCGG TGCGAATCGC GTCTCGGCGC TGAGGGCGGG GGCGACCGCG
TTGATCGACG CCCGCTGCGA CGAGTTGACG CTGCTTGCGC GCATCCGCGG GTTGATGCGG
CACGAAACCG GCGGGCTTGA GCATCCGGCA CCCGGCATGG CCGAGGCGGC GGCAGGCTTT
GCCGCAGAAA GCCGCCCCCA CGCGGTCTTC GTCGCCGACC GTCCGGCCAC CGCGTTGGGC
TGGCGGCATG CCTTGCAGGA CCGGGTGGAT TTCGCCATCT CGGTGCGCGA GCCCGAGCAT
GCGCTGGCCG AGGCTGCCTC GGCCCGGGTG GCGGATCTTT ATCTGATCGC CGCCGATATC
CAGCTGCCGG GCGACGGGTT GCGGCTGCTC TCCGAATTGC GCGCCCGCCC GCGCTCGCGC
GAGGCGGCGG TCGTCATCGC CCTGCGCCCC GGGCGGGGCG AGATGATGCC GGTGGCGCTG
GACCTCGGTG CCGGGGACGT GCTGCCTTGG GATCTGGCCC GCCCGGATGC CGCTCCCGAA
ACGGCGATGC GACTGCAAGC CCAGCTTGCC CGCAAGCATG AGGCCGACCG GCGCCGGCAC
GAGACGCAGC GCAACATGCG CTGGGCGATG ACCGACCCCC TGACCGGGCT GCACAATCGC
CGCTTTGCCT TGCCGCGCCT TGCCGAGCTC GCTGCCGAGG CGCAGGAGCG GCAGGGCGTC
CTGGCGGTCA TGTTGATGGA CCTGGACCAT TTCAAGCAGG TGAACGACAT CCACGGCCAT
CCCGCCGGCG ATGCCGTGCT GGCCGGGATA GCCGCACGGC TGGCCGCGAC CCTGCCCGAA
GGCGCCCTGC TCGCCCGCAT CGGCGGCGAG GAGTTCCTGG CCGTGCTGCC CGATTGCCCG
GCCCGCGCCG CCCGCCGCGT GGCCGAGAAC CTGCGCCATG CGGTGATGGC CGCACCCATC
CCCCTGCCGC AGGGCTGCAC GGCTGCCGAG CTATGCGTCA CCATTTCGGT CGGGGTGGCC
CAGGGCCACG GGGGCCCGCA CCTGCCGCCG GTCGACCCCG AGGCGCTGCT GGCCAGCGCC
GACCGCGCGC TGCTCAATGC CAAGTCCTCG GGGCGCAACC GAATCGTCAT GGCCTCGACG
GTGATCGCGG CATGA
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| Protein sequence | MIMAGRILVV DGLPTNRITM KVRLASACYE VSTASSGAEA LRLARLIHPQ IVLIGANLPD
MDGPALCNAM RALPCAADLP VLVQASGANR VSALRAGATA LIDARCDELT LLARIRGLMR
HETGGLEHPA PGMAEAAAGF AAESRPHAVF VADRPATALG WRHALQDRVD FAISVREPEH
ALAEAASARV ADLYLIAADI QLPGDGLRLL SELRARPRSR EAAVVIALRP GRGEMMPVAL
DLGAGDVLPW DLARPDAAPE TAMRLQAQLA RKHEADRRRH ETQRNMRWAM TDPLTGLHNR
RFALPRLAEL AAEAQERQGV LAVMLMDLDH FKQVNDIHGH PAGDAVLAGI AARLAATLPE
GALLARIGGE EFLAVLPDCP ARAARRVAEN LRHAVMAAPI PLPQGCTAAE LCVTISVGVA
QGHGGPHLPP VDPEALLASA DRALLNAKSS GRNRIVMAST VIAA
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