Gene Pden_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3978 
Symbol 
ID4582529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1117495 
End bp1117947 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content69% 
IMG OID639771287 
Productcytochrome C biogenesis protein 
Protein accessionYP_917740 
Protein GI119386685 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.297703 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC TGATCCTTTG CCTGTCGCTG CTGCTTGCGC TGCCCGCCTT CGCCGTCCAG 
CCCGACGAGG TGCTGTCCGA TCCGGCGCTG GAGGCGCGGG CGCGCGAGAT TTCCAAGACC
CTGCGCTGCC CGGTCTGCCA GGGCGAGACC ATCGACGAAT CGAATGCGGC GATCAGCCGC
GACCTGCGGC TCTACCTGCG CGAACGCCTG GTTGCCGGCG ACAGCGATAC CGAGGCGGTG
CAGGCCATCG CCGACCGTTT CGGCGAATAT GTCCTGTTCG AGCCCCCGGC GCGCGGCGCG
AACTGGCTGC TCTACCTGGC CGGGCCGGTC ATGGCGTTGC TGGCGCTGCT GGTGGGCTGG
CGCTTCGTCC GCTCGCGCAA CCTGGCCGAA GAGGGGCCGG CCAAGCTCAG CGACGAGGAA
AAGGCCAGGC TGGAAAGGAT CTTGCGCGAC TGA
 
Protein sequence
MRALILCLSL LLALPAFAVQ PDEVLSDPAL EARAREISKT LRCPVCQGET IDESNAAISR 
DLRLYLRERL VAGDSDTEAV QAIADRFGEY VLFEPPARGA NWLLYLAGPV MALLALLVGW
RFVRSRNLAE EGPAKLSDEE KARLERILRD