Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3970 |
Symbol | |
ID | 4582521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1107420 |
End bp | 1108631 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639771279 |
Product | SufS subfamily cysteine desulfurase |
Protein accession | YP_917732 |
Protein GI | 119386677 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.615432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTCG ACGTCGAAAA GGTCCGCGCC GATTTCCCGA TCCTGTCGCG GCAGGTGAAC GGCCGGCCGC TGGTCTATCT GGACAACGGC GCCTCGGCGC AGAAACCGCG CGTGGTGATC GACGCCATCA CCCGCGCCTA TGAGGCGGAA TATGCCAATG TCCATCGCGG GCTGCATTTC CTGTCCAACC TCGCGACCGA GAATTACGAG CGCGTGCGCG CCATCATCGC CCGCTTCCTG AACGCCCCGC GCGAGAACGA GGTGATCTTC ACCTCGGGCG CGACCGAAGG AATCAACCTC GTCTCCTATG GCTGGGCCGC GCCCCGCCTG CAGGCCGGCG ACGAGATCGT GCTGTCGGTG CTGGAGCATC ACGCCAATAT CGTGCCCTGG CATTTCCTGC GCGAGCGCCA GGGCGTGGTG CTGAAATGGG TCGAGCCCGA GCCCGACGGC TCGCTGCCGC CCGAAAAGGT GCTGGCGGCG GTGGGCCCGC GCACCCGGCT GATCGCCGTC ACGCATATGT CGAACGTGAC CGGCACCGTG GTCGATGTCG GCGCCATCGC ACGCGGCACC TCGGTGCCGG TTCTGGCCGA CGGGTCGCAG GCCGCCGTGC ATATGCCGGT GGACCTGTCC GCGCTCGGCG TCGATTTCTA CTGCATTACC GGGCACAAGC TCTATGGCCC TTCGGGCTCG GGTGCGATCT GGATCCGGGC CGAGCGCCAG GCCGAGATGC GCCCCTTCAT GGGCGGCGGC GACATGATCC GCACCGTCAC CCGCGAAAGC ATCGACTATG CCGACCCGCC GCTGCGCTTC GAGGCCGGCA CGCCCGGCAT CGCCAACCAG ATCGGGCTGG GTGCGGCGCT GGAATACCTG ATGGCGCTTG GCATGGAGAA TGTCGCCGCG CATGAACGCG ACCTACGCGA CTATGCCCGC GACCGGCTGC GCAGCCTGAA CTGGCTGTCG GTGCAGGGCG ACGCGGCGGA CAAGGGCGCG ATCTTCTCGA TGACGATGCA GGGCGCACAT GCGCATGACA TCTCGACCAT CCTCGACAAG CGCGGCATCG CGGTGCGGGC GGGCACGCAT TGCGCCATGC CATTGCTGGA TTTCTTCGGC GTCAGCGCCA CGGCGCGCGC CAGTTTCGCG ATGTACAACA CCCGCGCCGA AGTCGATGCG CTGATCGACG GGCTGACCTT CTGCCGCGAG CTTTTTGCCT GA
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Protein sequence | MNFDVEKVRA DFPILSRQVN GRPLVYLDNG ASAQKPRVVI DAITRAYEAE YANVHRGLHF LSNLATENYE RVRAIIARFL NAPRENEVIF TSGATEGINL VSYGWAAPRL QAGDEIVLSV LEHHANIVPW HFLRERQGVV LKWVEPEPDG SLPPEKVLAA VGPRTRLIAV THMSNVTGTV VDVGAIARGT SVPVLADGSQ AAVHMPVDLS ALGVDFYCIT GHKLYGPSGS GAIWIRAERQ AEMRPFMGGG DMIRTVTRES IDYADPPLRF EAGTPGIANQ IGLGAALEYL MALGMENVAA HERDLRDYAR DRLRSLNWLS VQGDAADKGA IFSMTMQGAH AHDISTILDK RGIAVRAGTH CAMPLLDFFG VSATARASFA MYNTRAEVDA LIDGLTFCRE LFA
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