Gene Pden_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3966 
Symbol 
ID4582517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1104253 
End bp1105008 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content64% 
IMG OID639771275 
ProductFeS assembly ATPase SufC 
Protein accessionYP_917728 
Protein GI119386673 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.304884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAA TCAAGAATCT GCACGTCAAG CTTGAGGATG AGGACAAGCA GATCCTCAAA 
GGCGTCGATC TGACCGTCCC CGCTGGCGAG GTCCATGCCA TCATGGGGCC GAACGGCTCG
GGCAAGTCGA CGCTGTCCTA TGTGCTTTCG GGCCGCGACG GCTACGAGGT GACCGGGGGC
GAGGCGACGC TGGACGGCGA AAGCCTGCTG GAGATGGAAC CCGAGGAGCG TGCGGCCGCT
GGCCTGTTCC TGGCCTTCCA GTATCCGGTC GAGATCCCGG GCGTCGGCAA CATGACCTTC
CTGCGCACCG CCGTGAACGC GCAGCGCAAG GCGCGCGGCG AGGAAGAGCT TTCCTCGGCC
GATTTCCTCA AGCTGATCCG CCAGAAGGCC GCGACGCTGA AGATCGACAG CGAGATGCTG
AAGCGCCCGG TCAATGTCGG CTTCTCGGGT GGCGAGAAAA AGCGCAACGA GATCTTGCAG
ATGGCCATGC TGGAGCCGAG CATGTGCATC CTGGACGAGA CCGATTCCGG CCTTGACGTG
GACGCGATGC GGCTGGTGGC CGAGGGCGTG AACGCGCTGC GTTCGCCCGA CCGCGCCTTT
CTGGTGATCA CACATTACCA GCGGCTTCTG GACCATATCA AGCCGGACGT GGTGCATATC
ATGGCCGATG GCCGCATCGT GCGCACCGGC GGCCCCGAAC TGGCGCTGGA GGTCGAGCAG
AACGGCTACG GCGATCTGCT GGCGGAGGTC GGATGA
 
Protein sequence
MLEIKNLHVK LEDEDKQILK GVDLTVPAGE VHAIMGPNGS GKSTLSYVLS GRDGYEVTGG 
EATLDGESLL EMEPEERAAA GLFLAFQYPV EIPGVGNMTF LRTAVNAQRK ARGEEELSSA
DFLKLIRQKA ATLKIDSEML KRPVNVGFSG GEKKRNEILQ MAMLEPSMCI LDETDSGLDV
DAMRLVAEGV NALRSPDRAF LVITHYQRLL DHIKPDVVHI MADGRIVRTG GPELALEVEQ
NGYGDLLAEV G