Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3964 |
Symbol | |
ID | 4582515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1102409 |
End bp | 1103935 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639771273 |
Product | cysteine desulfurase activator complex subunit SufB |
Protein accession | YP_917726 |
Protein GI | 119386671 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00244471 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTAG AGATCGGCGA GGCAATCGAA ATCCGCGAGG GCGTAGACCG CGAGACCGTC GAGACCGTCC AGAACATGGG GTCCTACAAA TACGGCTGGG ATACCGAGAT CGAGATGGAA TATGCCCCCA GGGGCATCAA CGAGGATATC GTCCGGCTGA TCTCGAAGAA GAACGAGGAA CCGGAATGGA TGACCGAGTG GCGGCTGCAG GCCTTTCGCC GCTGGCAGAC CATGACCGAG CCGAAATGGG CGATGCTGAA CTATCCCGAG ATCGACTATC AGGACCAGTA TTACTACGCC CGCCCGAAAA GCATGCAGGT CAAGCCCAAG TCGCTGGACG AGGTCGACCC CAAGCTGCTG GCCACCTATG AAAAGCTGGG CATCCCGCTG AAGGAGCAGA TGATCCTGGC CGGGATCGAG GGCGCCGAGG GCGCACCGGC CGAAGGGCGC AAGGTCGCGG TCGATGCTGT CTTCGACAGC GTCAGCGTCG GCACCACCTT CAAGGACGAA CTGGCCAAGG CCGGGGTGAT CTTCTGCTCG ATCTCGGAAG CCATCCGCGA ACATCCCGAA CTGGTGAAGA AATACCTGGG CTCGGTCGTG CCGCAGTCGG ACAATTTCTT CGCCACGCTG AACTCGGCGG TCTTTTCGGA CGGCAGCTTC GTCTATGTGC CGCCGGGGGT GCGCTGCCCG ATGGAGCTTT CGACCTATTT CCGCATCAAT GCCGAGAATA CCGGCCAGTT CGAGCGCACG CTGATCATCG CCGACAAGGG CTCTTACGTC AGCTACCTGG AGGGCTGCAC CGCGCCCAAG CGCGACGTGG CGCAGCTGCA TGCCGCGGTG GTCGAGATCG TCGTGCTGGA GGATGCCGAG GTCAAGTATT CGACCGTCCA GAACTGGTTC CCCGGCGACG AGGAAGGCAA GGGCGGCATC TACAACTTCG TCACCAAGCG CGCGGATTGC CGCGAGGCAC GGGCCAAGGT GATGTGGACC CAGGTCGAGA CCGGCTCGGC CATCACCTGG AAATACCCGT CCTGCATCCT GCGCGGCGAC GAGTCGCAGG GCGAGTTCTA TTCCATCGCC ATCGCCAACA ACCACCAGCA GGCCGACACC GGCACCAAGA TGATCCACCT TGGCAAGAAC ACCCGCTCGC GCATTGTTTC CAAAGGGATT TCCGCCGGAC AGGCGCAGAA TACCTATCGC GGCCTCGTGT CCATGCACCC GCGCGCCAAG AACAGCCGCA ACTATACGCA ATGCGACAGC CTGCTGATCG GCGACAAATG CGGCGCCCAT ACCGTGCCCT ATATCGAGGT GAAAAATACC TCGTCCTGTG TGGAGCATGA GGCGACAACC TCGAAAGTGG ATGACGACCA GCTGTTCTAT TGCCGCCAGC GCGGCATGGA CGAGGAAGAG GCCGTCGCGC TGGTTGTGAA CGGCTTCTGC CGCGAGGTCC TGCAGGCCCT GCCGATGGAA TTCGCCATGG AGGCGCAGTC GCTGGTCGCG ATCAGCCTGG AGGGGTCGGT CGGATGA
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Protein sequence | MTVEIGEAIE IREGVDRETV ETVQNMGSYK YGWDTEIEME YAPRGINEDI VRLISKKNEE PEWMTEWRLQ AFRRWQTMTE PKWAMLNYPE IDYQDQYYYA RPKSMQVKPK SLDEVDPKLL ATYEKLGIPL KEQMILAGIE GAEGAPAEGR KVAVDAVFDS VSVGTTFKDE LAKAGVIFCS ISEAIREHPE LVKKYLGSVV PQSDNFFATL NSAVFSDGSF VYVPPGVRCP MELSTYFRIN AENTGQFERT LIIADKGSYV SYLEGCTAPK RDVAQLHAAV VEIVVLEDAE VKYSTVQNWF PGDEEGKGGI YNFVTKRADC REARAKVMWT QVETGSAITW KYPSCILRGD ESQGEFYSIA IANNHQQADT GTKMIHLGKN TRSRIVSKGI SAGQAQNTYR GLVSMHPRAK NSRNYTQCDS LLIGDKCGAH TVPYIEVKNT SSCVEHEATT SKVDDDQLFY CRQRGMDEEE AVALVVNGFC REVLQALPME FAMEAQSLVA ISLEGSVG
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