Gene Pden_3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3962 
Symbol 
ID4582513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1100033 
End bp1101343 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content70% 
IMG OID639771271 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_917724 
Protein GI119386669 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.159664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAGGG CGAATGACAC GGCAGAGGAC AGGCCCATGC AAGGCAGCCG CATATTGCTG 
ATCGTCGGCG GGGGCATCGC CGCGTTCAAG ATACCCGAGC TGATCCGCAT GATCCGGCGC
GACGGCGGCT CGGTCGTGCC GGTGCTGACA CGGGCGGGGG CGGAGTTCGT CACGCCGCTG
ACGCTGTCGG CGCTGGCCGA GGCGCCCTGC CATACCGAGC TGTTCGACCT GACCCGCGAA
TCCGAAATGG GCCATATCCA GTTGTCGCGG GCCGCCGATC TGGTGGTGGT CGCGCCGGCG
ACCGCCAACC TGCTGGGGCG GATGGCGGCA GGGATGGCGG ACGACCTGGC CACCACCCTG
CTTTTGGCGA CCGACAAGCC GGTCCTGGCC GCGCCGGCGA TGAACGTGCG CATGTGGCAG
CATCCGGCGA CACAGCGCAA CATCGACACG CTGGAGAACG ACGGCATCCG GCTCATTGGC
CCGGACGAGG GCGACATGGC CTGCGGCGAA TACGGCCCCG GCCGCATGGC CGAGCCCGAG
GCGATCCTGG GGGCGATTCG CGCGGCCCTC GGTCGCGAGC GGCCGTTGCG CCTGCCGCCC
GAAGCGGTGG TCTCGCTGCC CTCGCGGCGG CTGAGCGGCC GGCATGTCAT CGTGACCTCG
GGGCCGACGC ATGAGCCCAT CGACCCGGTG CGCTATATCG CCAACCGCTC CAGCGGGGCG
CAGGGCACGG CCATCGCCGC CGCGTTGCGC GACCTGGGTG CGCGGGTCAG CTTCGTCACC
GGCCCTGCCG AGGTGCCGCC GCCCGAAGGG GTCGAGGTGA TCGCGGTCGA GACCGCACGC
GCGATGCGCG ACGCCGTCGA GGCCGCCTTG CCGGCCGATG CCGCGGTGAT GGCCGCCGCC
GTCGCCGATT GGCATGTCGC CAATGCCAGG GCGGGCAAGA TCAAGAAGGA TGGCTCGGGC
CGGTTGCCCG AACTGCAATT CGCGGAAAAC CCCGACATCC TGGCATGGAT CAGCCAGCTT
GGCCGTGATC GTCCGTCGCT GGTGGTGGGC TTTGCGGCCG AGACCGACGA CGTGCTGGAA
AACGCCACCC GCAAGCGCAA GCGCAAGGGT TGCGACTGGA TCGTCGCCAA CGACGTCAGC
CCCGCCACCG GAATCATGGG CGGGACCGAG AATGCCGTCA CGCTGATTTC CGAGGCCGGG
GCGGAAAGCT GGCCGCGCCT TTCCAAGCAG GAGGTCGCGC TACGGCTTGC CGAGCGCATC
GCCGGGGCGT TGGACCATGC CCAGGACGGC ATGCCGGAGG AGCGCATATG A
 
Protein sequence
MCRANDTAED RPMQGSRILL IVGGGIAAFK IPELIRMIRR DGGSVVPVLT RAGAEFVTPL 
TLSALAEAPC HTELFDLTRE SEMGHIQLSR AADLVVVAPA TANLLGRMAA GMADDLATTL
LLATDKPVLA APAMNVRMWQ HPATQRNIDT LENDGIRLIG PDEGDMACGE YGPGRMAEPE
AILGAIRAAL GRERPLRLPP EAVVSLPSRR LSGRHVIVTS GPTHEPIDPV RYIANRSSGA
QGTAIAAALR DLGARVSFVT GPAEVPPPEG VEVIAVETAR AMRDAVEAAL PADAAVMAAA
VADWHVANAR AGKIKKDGSG RLPELQFAEN PDILAWISQL GRDRPSLVVG FAAETDDVLE
NATRKRKRKG CDWIVANDVS PATGIMGGTE NAVTLISEAG AESWPRLSKQ EVALRLAERI
AGALDHAQDG MPEERI