| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3952 |
|---|
| Symbol | |
|---|
| ID | 4582503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1087282 |
|---|
| End bp | 1088241 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639771261 |
|---|
| Product | methionine synthase I |
|---|
| Protein accession | YP_917714 |
|---|
| Protein GI | 119386659 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.225692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATC AGCTGTCGAG GATGCTCGGC GAACGCCCCT GGCTTCTGGC CGACGGGGCG
ACCGGGACCA ATCTCTACAA CATGGGGCTG GCGCCGGGTC AGGCGCCCGA CCTGTGGTGC
GAAACCCATC CCGAAAAGGT GCGCGAACTG CACCGGCAGA TGATCGCCTC GGGCGCCGAC
ATCATCCTGA CCAACAGCTT CGGCGCCAAT GCCAGTCGGT TGCGGCTGGC CAAGGCGCAG
GACAAGGTGG CCCAGCTGAA CCGCGCCGCC GCCCGTCTGG CGCGCGAGGC GGCGGCCGAG
GTCGGCCGCG CCGTGGTCGT CGCCGGCTCG ATCGGCCCGA TCGGCGAGAT CATGGCCCCG
ATGGGCCGGC TGACCGAGGC CGAGGCCGCC GCCATGTTCA CCGAACAGGC ACAGGCGCTG
AAGGAAGGCG GCGCCGATCT GCTGTGGGTC GAGACCATCA GCGCCGTCGA GGAGATGCGC
GCCGCCGCCA AGGCCGCGCA GGCCGTCGGC ATGCCCTGGT GCGGCATGAT GAGCTTCGAG
CCGGGCGGAC GCAGCATGAT GGGGGTGACG CCGCCGCAGC TTGCCTCGCT GATCGACCGG
CTGTCGCACC CGCCCATCGC CTATGGCGCG AATTGCGGCA CCGGCCCGGC CGAGCTGCTG
CTGGCGGTGG CCGGTTTCGC CGCCTCGGGC AACGAGCGTC CGCTGATCGC CAAGCCGAAT
GCCGGCGTGC CCCGCTATCA GGACGGCGGG CTGATCTATG ATGCGACGCC CGAGGTCATG
GCCGAATTCG CCGTGCTGGC CCGCGACCTG GGCGTGCGCA TCGTCGGCGG CTGCTGCGGC
ACTACGCCCG AGCATCTGGC CGCGATGCGC GACGCGCTGG TCGCCGCGCC GCGCGGGCCG
CGCCCCTCGC CCGAGCGCAT CTCGGCCCGC ATCGCCGAGG TCATGGGACC GGGGGAATAG
|
|---|
| Protein sequence | MPDQLSRMLG ERPWLLADGA TGTNLYNMGL APGQAPDLWC ETHPEKVREL HRQMIASGAD
IILTNSFGAN ASRLRLAKAQ DKVAQLNRAA ARLAREAAAE VGRAVVVAGS IGPIGEIMAP
MGRLTEAEAA AMFTEQAQAL KEGGADLLWV ETISAVEEMR AAAKAAQAVG MPWCGMMSFE
PGGRSMMGVT PPQLASLIDR LSHPPIAYGA NCGTGPAELL LAVAGFAASG NERPLIAKPN
AGVPRYQDGG LIYDATPEVM AEFAVLARDL GVRIVGGCCG TTPEHLAAMR DALVAAPRGP
RPSPERISAR IAEVMGPGE
|
|---|
| |