Gene Pden_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3944 
Symbol 
ID4582495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1081609 
End bp1082244 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content69% 
IMG OID639771253 
ProductGntR family transcriptional regulator 
Protein accessionYP_917706 
Protein GI119386651 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACG CCTATTCCCT GATCCTCTCC GCCATCGACA ACGGCAGCTA TCGCCCCGGC 
GACAGGCTGG TCGAATCCGA ACTGGCCGAA CGCTTCGGCG TTTCCCGCAC CCCGGTCCGC
GAGGCGCTGC AGCGGCTGGA AACCCAGTCC ATGCTGAAAC GCGACGGGCG CAGCCTGATC
GTCGCCACGC TGGACCACAA CCAACTGGCC GAGCTTTACA CGGTGCGCGC CGAACTCGAG
GCGCTGGCGG CGCGGCTGGC CGCCCGCCAC GCCACGCCCG AGGAGGTGCG CGTTCTGGCC
GGCATGGTCG AGGACGACCG CGCCATCCTG GGCGACCCGC AGGCCCTGGC ACGGGCGAAC
CGCCGCTTTC ACCACCAGAT CCACCTGGCC TCGCACAACC GCTATCTGGT GCAGCAGCTG
GACCTGGTGC ATCGCAGCAT GGCCCTGATG GCGCGCACCA GCCTGGCGGC ACAGGGCCGC
GACGTCGTCA CCCTGGACGA GCACCAGGCC ATCGTCGATG CCATCGCCGC CCATGACGGG
GCGGCGGCGG AACAGGCGCT GCGCCATCAC ATCTCGATGG CCTTCGAGAC CCGGCTGAAG
GAAGAAGCGC GGCTGGCCGA CGAGGAAGAG GATTGA
 
Protein sequence
MKDAYSLILS AIDNGSYRPG DRLVESELAE RFGVSRTPVR EALQRLETQS MLKRDGRSLI 
VATLDHNQLA ELYTVRAELE ALAARLAARH ATPEEVRVLA GMVEDDRAIL GDPQALARAN
RRFHHQIHLA SHNRYLVQQL DLVHRSMALM ARTSLAAQGR DVVTLDEHQA IVDAIAAHDG
AAAEQALRHH ISMAFETRLK EEARLADEEE D