Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3944 |
Symbol | |
ID | 4582495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 1081609 |
End bp | 1082244 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771253 |
Product | GntR family transcriptional regulator |
Protein accession | YP_917706 |
Protein GI | 119386651 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACG CCTATTCCCT GATCCTCTCC GCCATCGACA ACGGCAGCTA TCGCCCCGGC GACAGGCTGG TCGAATCCGA ACTGGCCGAA CGCTTCGGCG TTTCCCGCAC CCCGGTCCGC GAGGCGCTGC AGCGGCTGGA AACCCAGTCC ATGCTGAAAC GCGACGGGCG CAGCCTGATC GTCGCCACGC TGGACCACAA CCAACTGGCC GAGCTTTACA CGGTGCGCGC CGAACTCGAG GCGCTGGCGG CGCGGCTGGC CGCCCGCCAC GCCACGCCCG AGGAGGTGCG CGTTCTGGCC GGCATGGTCG AGGACGACCG CGCCATCCTG GGCGACCCGC AGGCCCTGGC ACGGGCGAAC CGCCGCTTTC ACCACCAGAT CCACCTGGCC TCGCACAACC GCTATCTGGT GCAGCAGCTG GACCTGGTGC ATCGCAGCAT GGCCCTGATG GCGCGCACCA GCCTGGCGGC ACAGGGCCGC GACGTCGTCA CCCTGGACGA GCACCAGGCC ATCGTCGATG CCATCGCCGC CCATGACGGG GCGGCGGCGG AACAGGCGCT GCGCCATCAC ATCTCGATGG CCTTCGAGAC CCGGCTGAAG GAAGAAGCGC GGCTGGCCGA CGAGGAAGAG GATTGA
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Protein sequence | MKDAYSLILS AIDNGSYRPG DRLVESELAE RFGVSRTPVR EALQRLETQS MLKRDGRSLI VATLDHNQLA ELYTVRAELE ALAARLAARH ATPEEVRVLA GMVEDDRAIL GDPQALARAN RRFHHQIHLA SHNRYLVQQL DLVHRSMALM ARTSLAAQGR DVVTLDEHQA IVDAIAAHDG AAAEQALRHH ISMAFETRLK EEARLADEEE D
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