Gene Pden_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3936 
Symbolgmk 
ID4582487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1073313 
End bp1073951 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID639771245 
Productguanylate kinase 
Protein accessionYP_917698 
Protein GI119386643 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATGG AGCGCAGCGG ACTTCTGGTG ATCCTGTCCT CGCCCTCGGG GGCGGGCAAA 
TCGACGCTGG CGCGGCAGCT GATGGACTGG GATCCGGGCC TGCGCTTTTC CGTCTCGGCC
ACCACCCGCA GGCCGCGCCC CGGCGAGGTC GAGGGCGAGC ATTACTATTT CCGCACCGCC
GAGCAGTTCC GCGCCATGGT CGCGGCGGGC GAGATGCTGG AACATGCCGA GGTCTTCGGC
AATTTCTACG GCACCCCGCG CGGCCCGGTC GAGGAGGCGA TGCGCGCCGG CCGCGACACT
CTGTTCGACG TGGACTGGCA GGGCGGCCAG CAGATCCGCG CGTCTAGCCT TGGCGGACAT
GTCATCTCGA TCTTCGTGCT GCCGCCCAGC CTGGCCGAGC TGGAGCGCCG GCTGATCTCG
CGCCAGCAGG ACGCGCCGGA GGTGATCGCC GGCCGCATGC GCAAAAGCCG GGACGAAATC
AGCCATTGGG CGGAGTACGA TTATGTCATC GTCAACGACG ACCTGGACCG CAGCGCCGAG
GCGCTGAAGA CCATCCTGCG GGCCGAGCGG ATGCGCCGCG CCCGGCAGGT GGGGCTTGGC
CCCTTCGTTC GGGCGCTCAT GGAGGAGGAA AGCGCATGA
 
Protein sequence
MEMERSGLLV ILSSPSGAGK STLARQLMDW DPGLRFSVSA TTRRPRPGEV EGEHYYFRTA 
EQFRAMVAAG EMLEHAEVFG NFYGTPRGPV EEAMRAGRDT LFDVDWQGGQ QIRASSLGGH
VISIFVLPPS LAELERRLIS RQQDAPEVIA GRMRKSRDEI SHWAEYDYVI VNDDLDRSAE
ALKTILRAER MRRARQVGLG PFVRALMEEE SA