Gene Pden_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3926 
Symbol 
ID4582477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1062638 
End bp1063684 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content71% 
IMG OID639771235 
Productphosphoribosylaminoimidazole synthetase 
Protein accessionYP_917688 
Protein GI119386633 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0150] Phosphoribosylaminoimidazole (AIR) synthetase 
TIGRFAM ID[TIGR00878] phosphoribosylaminoimidazole synthetase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC GCAAGAGCGG CCTGTCCTAT GCCGAGGCCG GAGTGGATAT CGACGCGGGC 
AATGCGCTGG TCGAGCGGAT CAAGCCCGCC GCCGCCGCCA CCCGCCGCCC GGGCGTGATG
GAGGGGCTCG GCGGTTTCGG CGCGCTGTTC GATCCGCGGG CCGCGGGTTA CCGCGATCCG
GTGCTGGTGG CCGCGACCGA CGGTGTCGGC ACCAAGCTGC GCATCGGCAT CGATACGGGC
GAGCTTGACG GGCTGGGCAT CGACCTTGTC GCCATGTGCG TGAACGACCT GGTCTGCCAG
GGCGCCGAGC CCCTGTTCTT CCTCGACTAT TTCGCCACCG GCAAGCTGTC GGTCGATGAG
GCGGCGCGAG TCATCAACGG CATTGCCGAA GGCTGCCACC GTTCCGGTTG CGCACTGATC
GGCGGCGAGA CGGCCGAGAT GCCCGGCATG TATGCCCGCG GCGACTTCGA CCTTGCCGGC
TTTGCCGTCG GCGCGATGGA GCGCGGCACG GCCCTGCCGG CGGGCGTCGC GGACGGCGAC
GTCCTGCTGG GCCTTGCCTC GGACGGGGTG CATTCCAACG GATTCTCGCT GGTGCGCAGG
GTGGCCGACC ATGCCGGGCT CGACTGGAAC GCGCCTGCGC CCTTCGGCAT GGGCACGCTG
GGCCAGGCGC TTCTGGTCCC GACCCGGCTT TATGTGCGTC CGGTGCTGGC TGCGATCCGT
GCCGGCGGCG TGCATGCGGC GGCCCATATC ACCGGCGGCG GCATCACGGA AAACCTGCCG
CGCGTCCTGC CCGAGGGGCT GGGGGCCCAG GTCGACCTCG ACAGCTTCAG CCTGCCACCG
GTATTCGACT GGCTGGCCGA GGCCGGCGGG ATCGCCGAGG CCGAGATGCT CAAGACCTTC
AACTGCGGCA TCGGCATGAT CCTGGCCGTC GCCGCCGATC GTGCCGCCGC AATCGAGGCG
CTGCTGAAGG CCGAGGGCGA GACCGTGTTC CGCCTCGGCC AGGTCAGCCC CGGCGCAGGC
GTGGGCTACA GCGGCCGGCT GCGGTGA
 
Protein sequence
MTERKSGLSY AEAGVDIDAG NALVERIKPA AAATRRPGVM EGLGGFGALF DPRAAGYRDP 
VLVAATDGVG TKLRIGIDTG ELDGLGIDLV AMCVNDLVCQ GAEPLFFLDY FATGKLSVDE
AARVINGIAE GCHRSGCALI GGETAEMPGM YARGDFDLAG FAVGAMERGT ALPAGVADGD
VLLGLASDGV HSNGFSLVRR VADHAGLDWN APAPFGMGTL GQALLVPTRL YVRPVLAAIR
AGGVHAAAHI TGGGITENLP RVLPEGLGAQ VDLDSFSLPP VFDWLAEAGG IAEAEMLKTF
NCGIGMILAV AADRAAAIEA LLKAEGETVF RLGQVSPGAG VGYSGRLR