| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3922 |
|---|
| Symbol | |
|---|
| ID | 4582473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 1057325 |
|---|
| End bp | 1058164 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639771231 |
|---|
| Product | regulatory proteins, IclR |
|---|
| Protein accession | YP_917684 |
|---|
| Protein GI | 119386629 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.959177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTTC AAATCCGCAA AAGGGGCCGT CCGAGGGGAC GTGCCGGCGG CCTTGGCGCC
GAGGATTCGG GCGGCATCCG GGCGCTGGAC CGGGCGCTGG ACATCCTTGA CCTGATCGCG
GTCTCCAGCG GGTTGACCCT GACCGAGATC GCGCAGCGGC TGGACATGGC GCCTTCGACC
GTGCACCGGG TGCTGGTGAC GCTGGCGGCG CGCGGGGTGG CGGAAAGCGA CAGCCAGACG
CAGGCATGGC ATGTCGGGCC GACGGCGTTC CGGCACGGCT CGGCCTTCAT GCGCCGCTCG
GGCCTGGTCG AGCGGGCGCG GCCGCTTCTG CGCCGGCTGA TGGAGGTGAC GGGCGAGACG
GCGAACCTGG GCATCCTGAA CGGCGATGCG GTCCTGTTCC TAAGCCAGGC CGAGACGCAT
GAGACGATCC GCGCCTTCTT TCCGCCCGGC ACGCGCTCGG CGCTGCATGC CTCGGGGATC
GGCAAGGCGT TGCTGGCCCA TGCCCGGCCC CTGGACCTGA AGCGGATGCT GCGCGAGATG
CGGCTGGAGC GGTTCACCGA CATGACCCTG ACCGATCCCG CAGCACTGGT CGAGGATCTC
GTGCAGATCC GCGCCCGCGG CTATGCGCTG GACAACGAGG AGCGCACGCC CGGCATGCGC
TGCATCGCCG CGCCGATCTT CGACCTTGCC GGCGAGGCGG CGGCGGGGAT CTCGGTTTCG
GGGCCGACAT TGCGCATGTC GGATGCCCGG CTTTCCGCCA TGTCCGATGC GGTGATCGAG
GCCGCGCGGG AGCTGTCCTT CGGCATGGCG CCGCGCAAGG ATGCCGGCGA AAGAGCCTGA
|
|---|
| Protein sequence | MSVQIRKRGR PRGRAGGLGA EDSGGIRALD RALDILDLIA VSSGLTLTEI AQRLDMAPST
VHRVLVTLAA RGVAESDSQT QAWHVGPTAF RHGSAFMRRS GLVERARPLL RRLMEVTGET
ANLGILNGDA VLFLSQAETH ETIRAFFPPG TRSALHASGI GKALLAHARP LDLKRMLREM
RLERFTDMTL TDPAALVEDL VQIRARGYAL DNEERTPGMR CIAAPIFDLA GEAAAGISVS
GPTLRMSDAR LSAMSDAVIE AARELSFGMA PRKDAGERA
|
|---|
| |