Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3914 |
Symbol | |
ID | 4582465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1048159 |
End bp | 1049406 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639771223 |
Product | hypothetical protein |
Protein accession | YP_917676 |
Protein GI | 119386621 |
COG category | [S] Function unknown |
COG ID | [COG3748] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.410571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATT TCGCCGTCAT CTGGGATTGG CTCGCCTTTG CCATCCGATG GACGCATGTC GTCACCGCCA TCTGCTGGAT CGGTTCGTCC TTCTATTTCG TCGCCCTCGA CCTCGGGTTG CGCAAGGTGC CCGGCCTGCC CCCCGGCGCG CATGGCGAGG AATGGCAGGT CCATGGCGGC GGCTTCTACC ATATCCAGAA ATACCTGGTC GCGCCCGAGC GGATGCCCGA GCACCTGATC TGGTTCAAAT GGGAAAGCTA CATGACCTGG ATCTCGGGGG CGGCGCTCCT GATGGTCACC TATTGGGTCG GCTCCGAACT GTTCCTGATC GACCCCGCCA AGATGGATCT GGCGCCTTGG CAGGCGATCC TGATCTCGGC CGGCTCGCTG TCGATCGGCT GGCTGATCTA TACCAACCTG TGCAAGTCGA AGCTGGGCGA GACCCCGACC CTGCTGATGC TGATCCTGTT CGGGCTGCTG ATGGTCATGG GCTGGGCCTA TAACCAGGTC TTCACCGGCC GCGCGGTCAT GCTGCACCTG GGCGCCTTCA CCGCTACGAT CATGACGGCG AACGTGTTCT TCGTCATCAT GCCGAACCAG CGCATCGTCG TCGCCGACCT CAAGGCCGGG CGTCCCGCCG ATCCGAAATA CGGCAAGATC GCCAAGCTGC GCTCGACGCA TAACAACTAC CTGACCCTGC CGGTCGTGTT CCTGATGCTG TCGAACCACT ATCCGCTGGC CTTCGCGACG GAATACAACT GGGTGATCGC CGGGCTGATC TTCCTGATGG GCGTGACCAT CCGGCATTTC TTCAACACCA TGCATGCCGG CGGCGGGATG CGCAGGTGGA CCTGGGCCGT GACCACCATC CTGTTCGTCA TCGTCATGTG GCTCTCGACC GCGCCGATGT TCCGCCAGAC GCTGGAGGAG GCCGAGGCGC GCGTCCTGAC GCCCACGCAG CAGGCCATGG TCGACGTGGC CGGCTGGGAC GACGCCTACA ACGCCGTCAT GGGCCGCTGC TCGATGTGCC ATGCCAGGGA GCCCTCTTAC GAGGGCATCC ACACCGCGCC CAAGGGCGTC CTGCTGGAGA CCCCCGACGA CATCACCCGC GCCGCGCGCG AAATCTATAT CCAGGCCGGC GTGACCGACG CCATGCCGCC CGCCAATGTC AGCTTCATGG AGCCGCAGGA ACGGCAGGCG ATCATCGACT GGTATCGCAG CCTGCCCAGG ACCTTTGCCC TGAACTGA
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Protein sequence | MSDFAVIWDW LAFAIRWTHV VTAICWIGSS FYFVALDLGL RKVPGLPPGA HGEEWQVHGG GFYHIQKYLV APERMPEHLI WFKWESYMTW ISGAALLMVT YWVGSELFLI DPAKMDLAPW QAILISAGSL SIGWLIYTNL CKSKLGETPT LLMLILFGLL MVMGWAYNQV FTGRAVMLHL GAFTATIMTA NVFFVIMPNQ RIVVADLKAG RPADPKYGKI AKLRSTHNNY LTLPVVFLML SNHYPLAFAT EYNWVIAGLI FLMGVTIRHF FNTMHAGGGM RRWTWAVTTI LFVIVMWLST APMFRQTLEE AEARVLTPTQ QAMVDVAGWD DAYNAVMGRC SMCHAREPSY EGIHTAPKGV LLETPDDITR AAREIYIQAG VTDAMPPANV SFMEPQERQA IIDWYRSLPR TFALN
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