Gene Pden_3911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3911 
Symbol 
ID4582462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1045807 
End bp1046553 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID639771220 
Producthypothetical protein 
Protein accessionYP_917673 
Protein GI119386618 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.187806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCCTGCTGAT GCTCGCCGCC GGATTCCTGG GCGGGATGCT GAACGCCGTC 
GCCGGGGGCG GCACCTTCAT CACCTTCCCC GCCCTCGTCG CCAGCGGCGT GCCGGTGGTC
TCGGCCAATG CCACCAGCAC GGTCGCCGCC CTGCCGGGCT ACCTGTCCGC CGCGCTGGGG
TTTCGCCACG AGATCGCGCA GATCGAGCGT GCATTGGTGC TGCGGCTGAC CTTCTGGACG
CTGGCCGGCG GCATCGTCGG CTCCTGCCTG CTGCTGGTCT CGTCGAACCA GGCCTTCGCG
GTGCTGGTGC CCTTCCTGCT GCTGGCGGCG ACCTCGGTCT TCATCTGGGG CGCGCAGGTG
CGGGAATGGG CGGCGCAGCA TCGCAACGCC GCGGCACCCT TCGGCGCCGG GACCATGGTG
CCGGTGGCAA TCTACGGCGG CTATTTCAAC GGCGGGCTGG GGATCGTGCT GCTGGCGCTC
TTCGCGCTTT GGGGCATGAC GCAGCTGAAC CAGATGAACG GGCTGAAGAA CTGGCTGTCC
TTCGCGCTGT CGGTGATCTC CTTCGCGATC TTCGCGGCGG GCGGGCAGGT CGCCTGGTGG
CCCGCGGCGG TAATGAGCCT GGGCACTGTC CTCGGCGGCT ATCTGGGCGC GCCAGTGGCG
CGGCGAATCC CGATCCCGGT GTTGCGGGCA TTGATCGCGG CCATCGGCTT TGGCATGACG
GCGCTGTTCC TCTGGCGGCT TTTCTGA
 
Protein sequence
MTDTLLMLAA GFLGGMLNAV AGGGTFITFP ALVASGVPVV SANATSTVAA LPGYLSAALG 
FRHEIAQIER ALVLRLTFWT LAGGIVGSCL LLVSSNQAFA VLVPFLLLAA TSVFIWGAQV
REWAAQHRNA AAPFGAGTMV PVAIYGGYFN GGLGIVLLAL FALWGMTQLN QMNGLKNWLS
FALSVISFAI FAAGGQVAWW PAAVMSLGTV LGGYLGAPVA RRIPIPVLRA LIAAIGFGMT
ALFLWRLF