Gene Pden_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3910 
Symbol 
ID4582461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1045429 
End bp1045779 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content68% 
IMG OID639771219 
Productendoribonuclease L-PSP 
Protein accessionYP_917672 
Protein GI119386617 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.119462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA TCAAGCGCAT CGAGACCGGC CCCCGCATGA GCCAGGCGGT CGTCCATAAC 
GGCACCATCT ACCTGGCCGG CCAGGTCGGC AAACCCGGCG AAACGGTGAC CCAGCAAACC
CGCGAGGTGC TGGCCCAGAT CGACCGGCTG CTGGCGGAAT GCGGCTCGGA CAAGACCCGC
ATCCTGTCGG CGCAGGTCTG GCTGGCCGAC ATGGCCGATT TCGCCGAGAT GAACGCAGTC
TGGGACGGTT GGGTCGCCCC CGGCCACGCC CCGGCCCGCG CCACCGGCGA ATCGGCCCTG
GCGACTCCCG ACTACAAGGT CGAGATCATC GTGGTCGCGG CGCAGAACTG A
 
Protein sequence
MSEIKRIETG PRMSQAVVHN GTIYLAGQVG KPGETVTQQT REVLAQIDRL LAECGSDKTR 
ILSAQVWLAD MADFAEMNAV WDGWVAPGHA PARATGESAL ATPDYKVEII VVAAQN