Gene Pden_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3907 
Symbol 
ID4582458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1042547 
End bp1043332 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID639771216 
ProductUDP-N-acetylglucosamine acyltransferase 
Protein accessionYP_917669 
Protein GI119386614 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 
TIGRFAM ID[TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0255212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAA CCCGCATCCA CCCCTCGGCC GTCGTGGACC CCGCCGCGCA GGTCGGCGAG 
GGATGCGAGA TCGGCCCGTT CTGCGTGATC GGTCCCGAGG TCGGCCTCGG CCGGGGCGTG
GTGCTGAAAT CCCATGTCGT CGTGGCGGGC GAGACCCTGA TCGGCGATGA GACCGTGGTC
TTCCCCTTTG CCTCGCTGGG CGAGGTGCCG CAGGACCTGA AGTTCCGGGG CGAGCGCACG
CGGCTGGAAA TCGGCGCCCG CAACCGCATC CGCGAATATG TCACCATGAA CCCGGGCACC
GAGGGCGGCG GCGGCGTCAC CCGGATCGGC GACGACGGCC TTTTCATGGC GGGCAGCCAT
GTCGCGCATG ACTGCCAGAT CGGCAACCGG GTGATCCTGG TCAACAACGC TTCGGTCGCC
GGCCATTGCG TGCTCGAGGA CGACGTGATC GTCGGCGGGC TGTCGGGCGT GCACCAGTTC
GTGCGCATCG GCCGCGGCGC GATGATCGGG GCGGTGACCA TGGTGACGGC GGATGTGATC
CCCTTCGGCC TGGTGCAGGG GCCGCGCGGC CATCTGGACG GGCTGAACCT GGTGGGGCTG
AAGCGCCGCG GCGCCTCGCG CGAGGAAATC CATGCGCTGC GCGACATGCT GGCGCAACTG
GGCCAGGGCA GCTTTCGCGA TACCGCCCGG CACCTGGCCG AGGCCGAGAA TGGCCCGATG
GTGCGCGAGG TGCTGGACTT CATCCTCGGT CCCTCGGACC GCAGCTTCCT GGCGCCCCAT
CCATGA
 
Protein sequence
MAETRIHPSA VVDPAAQVGE GCEIGPFCVI GPEVGLGRGV VLKSHVVVAG ETLIGDETVV 
FPFASLGEVP QDLKFRGERT RLEIGARNRI REYVTMNPGT EGGGGVTRIG DDGLFMAGSH
VAHDCQIGNR VILVNNASVA GHCVLEDDVI VGGLSGVHQF VRIGRGAMIG AVTMVTADVI
PFGLVQGPRG HLDGLNLVGL KRRGASREEI HALRDMLAQL GQGSFRDTAR HLAEAENGPM
VREVLDFILG PSDRSFLAPH P