Gene Pden_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3906 
Symbol 
ID4582457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1042009 
End bp1042554 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content64% 
IMG OID639771215 
Productbeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 
Protein accessionYP_917668 
Protein GI119386613 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0293502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAAGTC CGCGCCCCGT TGCTAGGCAA ATGAAAACAT TCCAAGAGGA CCGCATGGCC 
GCCGCCCCCA ACGATGACCA GACCGCCTAT ATCCCGCCGA CCGAAGTCGA TCTGGCGATG
ATCAAGCGCA TCCTGCCGCA TCGCTATCCC TTCCTGCTGG TGGACCGCGT TCGCGACATC
GTCCCGGCCG AAAGCTGCGT CGGCGTCAAG AACGTGACCT CGAACGAGCC GCATTTCGAA
GGGCATTTCC CGCAGGAGCC GGTCATGCCC GGCGTGCTGA TCATCGAGGC CATGGCGCAA
TCGGCGGCGG TGCTGGTCGG CGTCAGCCTG AATCTCGCCG ACAAGGGCAT GGGCACCTAT
TTCATGTCCA TCGACAAATG CCGCTTCCGC CAGAAGGTGG TGCCGGGCGA CGTGCTGGAG
CTGCACATGA AGACCCTGCG CGGCGGCGGC AAGATCTGGA AGTTCGAGGG CCGCGCCATC
GTCAACGGCC AGTTGGCCGC CGAGGCCGAG GTCATGGCCA TGCTGAACCG TGGCGACAAT
GGCTGA
 
Protein sequence
MPSPRPVARQ MKTFQEDRMA AAPNDDQTAY IPPTEVDLAM IKRILPHRYP FLLVDRVRDI 
VPAESCVGVK NVTSNEPHFE GHFPQEPVMP GVLIIEAMAQ SAAVLVGVSL NLADKGMGTY
FMSIDKCRFR QKVVPGDVLE LHMKTLRGGG KIWKFEGRAI VNGQLAAEAE VMAMLNRGDN
G